PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022762222.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 243aa    MW: 27003.7 Da    PI: 9.5459
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022762222.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF68.28e-221462149
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    ++i+n+sn qvtfskRr g++KKA+EL++LC++e+ ++ fs+ +k++ +
  XP_022762222.1 14 EKIKNESNLQVTFSKRRSGLFKKASELCTLCGTEIGILAFSPGNKVFSF 62
                    579******************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MGKKCLGRQK VEMEKIKNES NLQVTFSKRR SGLFKKASEL CTLCGTEIGI LAFSPGNKVF  60
SFGHPDVGTV VDRYLSSNPP ETSATSQLIE AHRNVNVREL NMHLTEVVSQ LEAERIRAEK  120
LNQMSKASQN NQNWWGARIE ELSLPQLQRL KSSLGELKKN VTKQAEKLLI QSANSQQLFM  180
GSSSAGVHPN YETKNFAFDA NMMPQGYSAP HLIPPGYSPN PEGYYPNPHG YCPGPPGFGR  240
GFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.15e-64M-type_MADS family protein