PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022762147.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 177aa    MW: 20422.2 Da    PI: 9.5409
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022762147.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF771.4e-24959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+i+n   rqvtfskRr g++ KA+ELS+LCdae+a+++fs+ gkl+eys+
  XP_022762147.1  9 KKIDNIAARQVTFSKRRIGLFNKAHELSTLCDAEIALLVFSPIGKLFEYSN 59
                    689**********************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MTRKKIQIKK IDNIAARQVT FSKRRIGLFN KAHELSTLCD AEIALLVFSP IGKLFEYSNT  60
RLKYLPAVPF NVLNPYLMTD MLSYKKLISA ILQEVDAFHI SLPCNLEHNT DILPFIFLFK  120
VKGDLSREIS LSSNILLETF ILQSIIKIPT ILNDYTLYFT TIKTCKLLSQ EKYLNLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24540.16e-27MIKC_MADS family protein