PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022761084.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

CPP

Protein Properties

Length: 780aa MW: 84988.1 Da PI: 5.3336

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022761084.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	51	2.8e-16	485	523	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkkskClk+YCeCfaag++C e C+C+dC+Nk XP_022761084.1 485 ACKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKP 523 589**********************************96 PP
2	TCR	50.4	4.3e-16	570	608	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN XP_022761084.1 570 RHKRGCNCKKSSCLKKYCECYQGGVGCSINCRCEGCKNA 608 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 780 aa Download sequence
MMDTPEKTQI NSSISKFDDS PVFNYINSLS PIKPVKSIHV TPTFNPFCFA SLPSIFTSPH 60 VSSHKESRFL KRHSNTDPSK PELSPGEGTT VSTNEDAGVE AGHLCDSSDE LQENFDTAVS 120 LGETSLELPN EPSRFANELP QTLKFDCGSP NCDPEPCIIE MNCVSESACT SVSIVPFVQE 180 ASEKGLSDGV EVVGICQIDQ KRETIGCEWE SLISDASDLL IFNSPNGPEA FRGVIQKSLD 240 PGARFCPALI SRFPQDDINE VCQTTVDSNE YKDPSLQPGE TGELKEINHV NGNFENTSVT 300 NCMAGSLTDY VESGMCAPFS LKPGSNLHRG LRRRCLDFEM LSARRKNLDD GSNSSSSVDN 360 QLVLGKPGND SSRCIVPGIG LHLNALAITS TDNKNTKHET FSSGTQKLSF PSSTPSILPP 420 TAGQEAVHEF FTSASTEKET NAVENGVQFA EDASQASAYL VNEEFNQNSP KKKRRRLEQA 480 GESEACKRCN CKKSKCLKLY CECFAAGVYC IEPCSCQDCF NKPIHEDTVL ATRKQIESRN 540 PLAFAPKVIR TSDSIPEVGD DSSKTPASAR HKRGCNCKKS SCLKKYCECY QGGVGCSINC 600 RCEGCKNAFG RKDGSAIVET EEEPEEEETD LSDNSGMNKK LEKTDILNSE EQNPVSALPT 660 TPLQLCRSLV QLPFSSKSKP PRSFIAIGSS STLFNGQRSK PNIIRPQNII EKHFQTVAED 720 EMPEILRGNS SPGTGIKTSS PNSKRISPPQ CELGSTPGRR SGRKLILKSI PSFPSLTPQH

Sequence ? help Back to Top

Protein Sequence Length: 780 aa Download sequence

MMDTPEKTQI NSSISKFDDS PVFNYINSLS PIKPVKSIHV TPTFNPFCFA SLPSIFTSPH  60
VSSHKESRFL KRHSNTDPSK PELSPGEGTT VSTNEDAGVE AGHLCDSSDE LQENFDTAVS  120
LGETSLELPN EPSRFANELP QTLKFDCGSP NCDPEPCIIE MNCVSESACT SVSIVPFVQE  180
ASEKGLSDGV EVVGICQIDQ KRETIGCEWE SLISDASDLL IFNSPNGPEA FRGVIQKSLD  240
PGARFCPALI SRFPQDDINE VCQTTVDSNE YKDPSLQPGE TGELKEINHV NGNFENTSVT  300
NCMAGSLTDY VESGMCAPFS LKPGSNLHRG LRRRCLDFEM LSARRKNLDD GSNSSSSVDN  360
QLVLGKPGND SSRCIVPGIG LHLNALAITS TDNKNTKHET FSSGTQKLSF PSSTPSILPP  420
TAGQEAVHEF FTSASTEKET NAVENGVQFA EDASQASAYL VNEEFNQNSP KKKRRRLEQA  480
GESEACKRCN CKKSKCLKLY CECFAAGVYC IEPCSCQDCF NKPIHEDTVL ATRKQIESRN  540
PLAFAPKVIR TSDSIPEVGD DSSKTPASAR HKRGCNCKKS SCLKKYCECY QGGVGCSINC  600
RCEGCKNAFG RKDGSAIVET EEEPEEEETD LSDNSGMNKK LEKTDILNSE EQNPVSALPT  660
TPLQLCRSLV QLPFSSKSKP PRSFIAIGSS STLFNGQRSK PNIIRPQNII EKHFQTVAED  720
EMPEILRGNS SPGTGIKTSS PNSKRISPPQ CELGSTPGRR SGRKLILKSI PSFPSLTPQH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	470	477	PKKKRRRL
2	471	476	KKKRRR
3	473	477	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-169	CPP family protein