PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022761048.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 416aa MW: 47079.1 Da PI: 5.2105

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022761048.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38	2.9e-12	208	259	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i A+e++++L+ XP_022761048.1 208 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGAIEFVRELE 259 79**************************...9***************9995 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MLFCYKLDFF QANFTGLDYS LDHHNHDPHH QDQLMKQPRI GETSGDNNGM IDYMLNNPHQ 60 QQQQISSSGF CATPTSFDKL SFADVMQFAD FGPKLALNQT RIPEEETGID PAGYFLRFPV 120 LNDKLEDQSL MLPPSGIENV EGRAAAGLMV EEKGNNIGED EEARVSDNAS VQLCFLGEDA 180 QNKNPIPEAK NKRKRPRTIK TSEEVESQRM THIAVERNRR KQMNEHLRVL RSLMPGSYVQ 240 RGDQASIIGG AIEFVRELEQ LLQCLESQKR RRLYGEASRQ MGDTSSMAIQ QQQQQQPFFP 300 PTSLPNDQIK LVDYDTGLRE ETAENKSCLA DVEVKLLGFD AMIKILCRRR PGQLVKTIAA 360 LEDLQLNILH TNITTIEQTV LYSFNVKVAS ESRFSAEDIA SSVQQIFSFI HSNCSM

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MLFCYKLDFF QANFTGLDYS LDHHNHDPHH QDQLMKQPRI GETSGDNNGM IDYMLNNPHQ  60
QQQQISSSGF CATPTSFDKL SFADVMQFAD FGPKLALNQT RIPEEETGID PAGYFLRFPV  120
LNDKLEDQSL MLPPSGIENV EGRAAAGLMV EEKGNNIGED EEARVSDNAS VQLCFLGEDA  180
QNKNPIPEAK NKRKRPRTIK TSEEVESQRM THIAVERNRR KQMNEHLRVL RSLMPGSYVQ  240
RGDQASIIGG AIEFVRELEQ LLQCLESQKR RRLYGEASRQ MGDTSSMAIQ QQQQQQPFFP  300
PTSLPNDQIK LVDYDTGLRE ETAENKSCLA DVEVKLLGFD AMIKILCRRR PGQLVKTIAA  360
LEDLQLNILH TNITTIEQTV LYSFNVKVAS ESRFSAEDIA SSVQQIFSFI HSNCSM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	209	220	RMTHIAVERNRR
2	269	273	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	1e-145	bHLH family protein