PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022760633.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARR-B

Protein Properties

Length: 680aa MW: 74463.6 Da PI: 6.3503

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022760633.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.5	7.2e-29	213	266	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl XP_022760633.1 213 KPRVVWSVELHQQFVTAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 266 79*****************.******************************8 PP
2	Myb_DNA-binding	41.6	3e-13	215	265	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qky+ XP_022760633.1 215 RVVWSVELHQQFVTAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 265 678***********************************************7 PP
3	Response_reg	73.2	1.1e-24	35	143	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l+ y ev+ + +e al +l+e++ +D+++ D+ mp+mdG++ll++i e +lp+i+++a + + + + + G XP_022760633.1 35 VLVVDDDPTCLMILEKMLRTCLY-EVTKCNRAETALCMLRENKngFDIVISDVHMPDMDGFKLLEHIGLEM-DLPVIMMSADDGKHVVMKGVTHG 127 89*******************.***********999999******************6654.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +e+l + XP_022760633.1 128 ACDYLIKPVRIEALKN 143 **********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 680 aa Download sequence
MNSSSGKGSM STASSSAAWK TGDVVPDKFP AGLRVLVVDD DPTCLMILEK MLRTCLYEVT 60 KCNRAETALC MLRENKNGFD IVISDVHMPD MDGFKLLEHI GLEMDLPVIM MSADDGKHVV 120 MKGVTHGACD YLIKPVRIEA LKNIWQHVVR KRRNEWKDFE QSGSVEEGDR QQKQSEDADY 180 SSSANEGNWK SSKKRKDDED ETDERDDTSS LKKPRVVWSV ELHQQFVTAV NQLGIDKAVP 240 KKILELMNVP GLTRENVASH LQKYRLYLRR LSGVSQHQGN LNNPFISSQE TTFGPLSSLN 300 GLDLQTLAAT GQLPAQSLAT LQAAGLGRST AKSGVPLPLV DQRNIFSFEN PKLRFGEGQQ 360 QHMNNNKQIN LLHGIPTTME PKQLASLHHT AQSIGNINMQ VTSHGAQSGQ NSSLLMQMAQ 420 PQARGPTLDS TVGHAPRLPS SMGQPILSNG IAANVSTRNG IPENIRAPGY NPVSQTSSML 480 NFPMNHTSEL PGNSFPLGST PGISSLTSRR AFQEEVNSEI KVPSGFMPSY AIFNDLNQHK 540 PQNWELENVG MTFDASQHSN SLQGNLDLTQ SVLVQQGFSS RQVNGQSRSA AVVSKAVFSA 600 ADGTEHVIAQ NVNQHLDSLL VDNTIRVKSE RVADASAANL FPDHFGQEDL MSALLKQQEG 660 IAPAENEFAF DGYSMDNIPG

Sequence ? help Back to Top

Protein Sequence Length: 680 aa Download sequence

MNSSSGKGSM STASSSAAWK TGDVVPDKFP AGLRVLVVDD DPTCLMILEK MLRTCLYEVT  60
KCNRAETALC MLRENKNGFD IVISDVHMPD MDGFKLLEHI GLEMDLPVIM MSADDGKHVV  120
MKGVTHGACD YLIKPVRIEA LKNIWQHVVR KRRNEWKDFE QSGSVEEGDR QQKQSEDADY  180
SSSANEGNWK SSKKRKDDED ETDERDDTSS LKKPRVVWSV ELHQQFVTAV NQLGIDKAVP  240
KKILELMNVP GLTRENVASH LQKYRLYLRR LSGVSQHQGN LNNPFISSQE TTFGPLSSLN  300
GLDLQTLAAT GQLPAQSLAT LQAAGLGRST AKSGVPLPLV DQRNIFSFEN PKLRFGEGQQ  360
QHMNNNKQIN LLHGIPTTME PKQLASLHHT AQSIGNINMQ VTSHGAQSGQ NSSLLMQMAQ  420
PQARGPTLDS TVGHAPRLPS SMGQPILSNG IAANVSTRNG IPENIRAPGY NPVSQTSSML  480
NFPMNHTSEL PGNSFPLGST PGISSLTSRR AFQEEVNSEI KVPSGFMPSY AIFNDLNQHK  540
PQNWELENVG MTFDASQHSN SLQGNLDLTQ SVLVQQGFSS RQVNGQSRSA AVVSKAVFSA  600
ADGTEHVIAQ NVNQHLDSLL VDNTIRVKSE RVADASAANL FPDHFGQEDL MSALLKQQEG  660
IAPAENEFAF DGYSMDNIPG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	0.0	ARR-B family protein