PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022760133.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 366aa MW: 40716.1 Da PI: 9.3866

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022760133.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	153.2	1.6e-47	97	234	2	136
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 ++kkdrhski+T++g RdRRvRls+e+a++fFdLqd+LGfdk+skt+eWLl+++k ai el+ ++ + c ++++s s+s + XP_022760133.1 97 PVKKDRHSKICTAQGVRDRRVRLSIEIAREFFDLQDMLGFDKASKTLEWLLTKSKNAIRELVMM--KHGNGCsGSGQRSLSSS----Pecemvaq 185 68***********************************************************9..44444542222222222....11122334 PP TCP 89 .kaaksaakskksqksaasalnlakesrakarararertrekmriknkl 136 + ++ + ks++++ ++ l kesrakarararertrekm+++n++ XP_022760133.1 186 nGELDKEGTALKSKSPELEVPLLVKESRAKARARARERTREKMCTRNST 234 3222222233444444444599*********************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MFSSTNNINP FSHLPSSSYH PLALPPPPPL LSHDSNDIFL NHHHDLVSAS SLLPPNEYSL 60 INMALLNNAT MIKQDGVSGL HGECFSASGF SIPAKKPVKK DRHSKICTAQ GVRDRRVRLS 120 IEIAREFFDL QDMLGFDKAS KTLEWLLTKS KNAIRELVMM KHGNGCSGSG QRSLSSSPEC 180 EMVAQNGELD KEGTALKSKS PELEVPLLVK ESRAKARARA RERTREKMCT RNSTSTHDQW 240 KRCPDASPQF LNQLRSLTHL EVSKKSDHSY GHNHNMASSF KIVAHQVEEP RASPSQFTSA 300 APRENVVEES IVIKRKLKPS TILGYQQNLA ASKDVSCNSS GNNYFPNLPQ NCDINGAMAH 360 YLLRYN

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MFSSTNNINP FSHLPSSSYH PLALPPPPPL LSHDSNDIFL NHHHDLVSAS SLLPPNEYSL  60
INMALLNNAT MIKQDGVSGL HGECFSASGF SIPAKKPVKK DRHSKICTAQ GVRDRRVRLS  120
IEIAREFFDL QDMLGFDKAS KTLEWLLTKS KNAIRELVMM KHGNGCSGSG QRSLSSSPEC  180
EMVAQNGELD KEGTALKSKS PELEVPLLVK ESRAKARARA RERTREKMCT RNSTSTHDQW  240
KRCPDASPQF LNQLRSLTHL EVSKKSDHSY GHNHNMASSF KIVAHQVEEP RASPSQFTSA  300
APRENVVEES IVIKRKLKPS TILGYQQNLA ASKDVSCNSS GNNYFPNLPQ NCDINGAMAH  360
YLLRYN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67260.2	2e-31	TCP family protein