PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022760020.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARR-B

Protein Properties

Length: 512aa MW: 58265.9 Da PI: 8.3747

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022760020.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	84.3	1.3e-26	215	272	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPkti...lelmkvkgLtlehvkSHLQkYRla 56 k+r++Wt+eLH+ Fv av+qL G +kA+Pk+i +++m+v+gLt+++++SHLQkYR++ XP_022760020.1 215 KQRMVWTQELHDMFVAAVNQL-GRDKAVPKKIlerMQAMNVNGLTRANIASHLQKYRMH 272 79*****************.******33335789***************96 PP
2	Myb_DNA-binding	43.7	6.6e-14	217	270	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT....TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg....kgRtlkqcksrwqkyl 48 r+ WT+e+++ +v av+qlG + +k+I ++m+ +g+t+ ++ s++qky+ XP_022760020.1 217 RMVWTQELHDMFVAAVNQLGRDkaVPKKILERMQamnvNGLTRANIASHLQKYR 270 789***************99*****************************7 PP
3	Response_reg	59.2	2.3e-20	34	143	1	108
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHH.HHHTTTSEEEEEESTTTHHHHHHHHHT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkei.reeepklpiivvtahgeeedalealka 92 +livdD+++ + +l+++l+k y ev+ ++ +++al+l++e + +D++++D+ mp+m+G++ll+ i e + l v+++ + + + + + XP_022760020.1 34 ILIVDDDRTCLLVLERMLRKLLY-EVTKCQLARDALALVREDKnrFDIVICDLHMPDMNGFKLLEIIgLETDLPLCHTVMSSDDGKGVVMKGIIH 127 8********************.***********887778******************7777755555666667778***** PP TESEEEESS--HHHHH CS Response_reg 93 GakdflsKpfdpeelv 108 Ga d+l Kp+ +e ++ XP_022760020.1 128 GACDYLIKPVRMESIR 143 ********998875 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MGEKKIQKSV LEKSSAMDKV GNYVVGEFPA GLKILIVDDD RTCLLVLERM LRKLLYEVTK 60 CQLARDALAL VREDKNRFDI VICDLHMPDM NGFKLLEIIG LETDLPLCHT VMSSDDGKGV 120 VMKGIIHGAC DYLIKPVRME SIRLIWQHVV RKKKRTLGEF RQPGNINVSD RLLLLEQANN 180 AVDQMPVRDL QSLKRTREDE DNDGGSSDEV TTAKKQRMVW TQELHDMFVA AVNQLGRDKA 240 VPKKILERMQ AMNVNGLTRA NIASHLQKYR MHLQKRGEPS TNNRDPNSFF EQASSFRQHN 300 LQFQPTGTSC LLPLQNHITP QSSSFERSAN ENLISTGPSH DQGGNVFDSI VSESSRCLPT 360 EFSLHDLSRA NLLYQNDFPG GDVVISNEEY LYRNIGNVNE LISHPLSAVD NQLIYEPSLL 420 QEIAVNGYLI YISSTPTASR KNFFFIKNMQ RSTYLFFLPF LSSYLVKTTS LKSQELAQIF 480 WIIVIKNYIN FLRNCLSIHR NISLQKFGGL YS

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MGEKKIQKSV LEKSSAMDKV GNYVVGEFPA GLKILIVDDD RTCLLVLERM LRKLLYEVTK  60
CQLARDALAL VREDKNRFDI VICDLHMPDM NGFKLLEIIG LETDLPLCHT VMSSDDGKGV  120
VMKGIIHGAC DYLIKPVRME SIRLIWQHVV RKKKRTLGEF RQPGNINVSD RLLLLEQANN  180
AVDQMPVRDL QSLKRTREDE DNDGGSSDEV TTAKKQRMVW TQELHDMFVA AVNQLGRDKA  240
VPKKILERMQ AMNVNGLTRA NIASHLQKYR MHLQKRGEPS TNNRDPNSFF EQASSFRQHN  300
LQFQPTGTSC LLPLQNHITP QSSSFERSAN ENLISTGPSH DQGGNVFDSI VSESSRCLPT  360
EFSLHDLSRA NLLYQNDFPG GDVVISNEEY LYRNIGNVNE LISHPLSAVD NQLIYEPSLL  420
QEIAVNGYLI YISSTPTASR KNFFFIKNMQ RSTYLFFLPF LSSYLVKTTS LKSQELAQIF  480
WIIVIKNYIN FLRNCLSIHR NISLQKFGGL YS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	5e-72	ARR-B family protein