PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022759950.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 278aa    MW: 32179.1 Da    PI: 7.4592
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022759950.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF50.33.1e-16948140
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviif 40
                    k ien+  r+  f kRrn +lKKA+ELS+LCd+++++ii+
  XP_022759950.1  9 KLIENEKARKKVFEKRRNSLLKKAKELSILCDIKILLIIY 48
                    569************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MGRRSMEMKL IENEKARKKV FEKRRNSLLK KAKELSILCD IKILLIIYEL DKQKTEIWPG  60
NDEEAEQIIN RFKQQLVRDE CKTACDSFSS KKERFDGKFA ISDHKCMINL FSKNELQKLC  120
YELDGKIAAV MNAIKSKQVL TEGPRSPKIL PDSQGIGFLD RERGKEVVIY QDPVHDIQQS  180
QSFQMLSHNP KFMESPMMMT TMMQNGISYP EFYGNSSSSS NIPYVPLPID YVHPSWMPPA  240
YIDSTFSMSY YDPTSYHIPP CLHYPMVPSF PSEWNASD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03060.26e-14M-type_MADS family protein