PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022759770.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 521aa    MW: 58422.7 Da    PI: 6.2556
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022759770.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS348.88.9e-1071585131374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                     l++lLlecA a+s ++l +a+++L +l ++asp++ +  +R++ayf++A+++r+ +s+ +++  l          +++  a+++f++vsP++kf+
  XP_022759770.1 158 LITLLLECAVAISVDNLGEAHRMLLELTQMASPYAlSCAERVVAYFAKAMSSRVINSWLGICFPLVN--Y-----KSVHCAFQAFNNVSPFIKFA 245
                     5789*******************************999**********************9944433..3.....34567899************ PP

            GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     h+t NqaIlea+++ ++vHiiD+di+qGlQWpaL++ La+R egpp++R+Tg+gs      e l etg++L++fA++lg++fef++ +ak++ ++
  XP_022759770.1 246 HFTSNQAILEAFHRRDKVHIIDLDIMQGLQWPALFHILATRIEGPPHVRMTGMGS----TMELLVETGKQLSNFAKRLGMSFEFHP-IAKKFGEI 335
                     *******************************************************....99*************************.7******* PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     ++ +++v++gE+la+++    h+l+d +++  +    +Lkl+ +l P+v+++veq+++h ++sFl+r++ +l+yys++fdsl a lp+++  r+ 
  XP_022759770.1 336 DITMIQVRRGETLAIHWLQ--HSLYDATGPDWK----TLKLFEQLAPRVITLVEQDLSH-GGSFLDRLVGSLHYYSTMFDSLGAYLPADDPSRHR 423
                     ******************9..999999999888....**********************.789******************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +E+ l+ +ei n++a  g +r  +  +l++Wr+ l +  F +vp+s++ ++qa+l+l++++  + y++ + +g+l lgWkd +L+++SaW+
  XP_022759770.1 424 IEHCLFYKEINNILAIGGPARSGED-KLKHWRSELARNCFLQVPMSSNSMAQAQLILNMFPpAHAYSLVQGDGTLRLGWKDTSLFTASAWT 513
                     ********************77665.5**********************************9999*************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 521 aa     Download sequence    
MMKGGFEVFH ATLDMIQPHY EPIWDFASVG FPTTIAVNSI PRQTLENGCI NLERNELSEW  60
VEQVTKQLID DLPADNTETD HSSFQAADTS MVCEDNFAPL LPGDFRPTKT VRSFSDGNCI  120
EELQWSNKLV GNQTNNVCEN NGGNGKGLSR LEEQGLSLIT LLLECAVAIS VDNLGEAHRM  180
LLELTQMASP YALSCAERVV AYFAKAMSSR VINSWLGICF PLVNYKSVHC AFQAFNNVSP  240
FIKFAHFTSN QAILEAFHRR DKVHIIDLDI MQGLQWPALF HILATRIEGP PHVRMTGMGS  300
TMELLVETGK QLSNFAKRLG MSFEFHPIAK KFGEIDITMI QVRRGETLAI HWLQHSLYDA  360
TGPDWKTLKL FEQLAPRVIT LVEQDLSHGG SFLDRLVGSL HYYSTMFDSL GAYLPADDPS  420
RHRIEHCLFY KEINNILAIG GPARSGEDKL KHWRSELARN CFLQVPMSSN SMAQAQLILN  480
MFPPAHAYSL VQGDGTLRLG WKDTSLFTAS AWTSHASRYS C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.11e-142GRAS family protein