PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022759454.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 338aa MW: 38017.9 Da PI: 8.1875

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022759454.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.9	0.00033	176	195	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r nL+ H+ XP_022759454.1 176 FSCPVCCKTFNRYNNLQMHM 195 89*****************9 PP
2	zf-C2H2	12.2	0.00055	260	282	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +C k F k + ++H +++ XP_022759454.1 260 FMCRKCEKAFAVKGDWRTHEKNC 282 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MADPCPNLFT GCFNFMPLNP HYTSFSTTAP TPNHPNPSSQ AHTSNIIFNE SSFHGQSTTH 60 PSSPPRKEAL PLINYLSSSR QEEINEPSSS SMEEYKNMNK EESLFSTIVD DESVTVALHI 120 GLPSPSSDLM RFRLSQSADV TNKLGGNGSA VSGYPLSKGQ YWIPTPTQIL VGPTQFSCPV 180 CCKTFNRYNN LQMHMWGHGS QYRKGPDSLR GTQPTAMLRL PCYCCAPACK HHINHPRARP 240 LKDFRTLQTH YKRKHGIKPF MCRKCEKAFA VKGDWRTHEK NCGKIWYCIC RSDFKHKRSL 300 KDHIKAFGPG HGAVGIDSFD EDDEHGSEFE LECDQPSM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-125	C2H2 family protein