PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022759198.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

CO-like

Protein Properties

Length: 383aa MW: 42151.8 Da PI: 6.0105

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022759198.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	16.9	1.3e-05	21	61	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 r+C+++ + + +C+ ++ +lC C H H+ XP_022759198.1 21 RVCDTCRSAACTVYCRADSAYLCTGCDARVHAAnrvasrHE 61 79****99***************99995555666665 PP
2	zf-B_box	31.2	4.6e-10	63	107	3	41
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 ++C+ +e+ ++ + C+ + lC++C e+H+ H++v+ XP_022759198.1 63 VWVCEACERAPAAFLCKADAASLCATCDAEIHSAnplarrHQRVT 107 689*****************************6688888999887 PP
3	CCT	70.3	4.8e-24	314	357	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eK+ktRkFeK+irY+sRKa+Ae+RpR+KGrF+k++ XP_022759198.1 314 REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRT 357 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MLKEETSDTG GGGGGGNNWA RVCDTCRSAA CTVYCRADSA YLCTGCDARV HAANRVASRH 60 ERVWVCEACE RAPAAFLCKA DAASLCATCD AEIHSANPLA RRHQRVTVLP ISGCLYGPSA 120 TDQGGRKVAS AAETEDGFMA TVGDETIAEE EDEAASWLLL NTGKNSSNQN NGFLFSGEVD 180 EYLDLVEYNS SVENQFNDQY NQQQQPYGIL HKSCGGDSVV PVQSGEGKDH LQQQQQQQHQ 240 RFQYGLDYDS SKAAYSYNGS ICHSVSLSSV DFGIVPESTM SDISISHTRP PKGTIDLFSG 300 PPIQMPHQLT PMDREARVLR YREKKKTRKF EKTIRYASRK AYAETRPRIK GRFAKRTDVE 360 VEVDQMFSTT LITETGYGIV PSF

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MLKEETSDTG GGGGGGNNWA RVCDTCRSAA CTVYCRADSA YLCTGCDARV HAANRVASRH  60
ERVWVCEACE RAPAAFLCKA DAASLCATCD AEIHSANPLA RRHQRVTVLP ISGCLYGPSA  120
TDQGGRKVAS AAETEDGFMA TVGDETIAEE EDEAASWLLL NTGKNSSNQN NGFLFSGEVD  180
EYLDLVEYNS SVENQFNDQY NQQQQPYGIL HKSCGGDSVV PVQSGEGKDH LQQQQQQQHQ  240
RFQYGLDYDS SKAAYSYNGS ICHSVSLSSV DFGIVPESTM SDISISHTRP PKGTIDLFSG  300
PPIQMPHQLT PMDREARVLR YREKKKTRKF EKTIRYASRK AYAETRPRIK GRFAKRTDVE  360
VEVDQMFSTT LITETGYGIV PSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02380.1	1e-132	CO-like family protein