PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022759172.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 314aa MW: 34973.5 Da PI: 4.61 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 57.5 | 2.4e-18 | 42 | 91 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+e E+rRR++iN++f++Lr+l+P++ ++K +Ka+ L +++eYI+ Lq XP_022759172.1 42 RSKHSETEQRRRSKINERFQTLRDLIPQN----DQKRDKASFLLEVIEYIQFLQ 91 899*************************9....9*******************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 314 aa Download sequence |
MVKSVATAQL HQEEEDDDDY EDKGETLKVE GKGSDQKTTA NRSKHSETEQ RRRSKINERF 60 QTLRDLIPQN DQKRDKASFL LEVIEYIQFL QEKLQMYEGS YQAWSQEPTK LIPWRNNHGL 120 AESFIDHSQV MKNGSSCEDD VVIPSMLANM QNSIETDLGN AAVFKALDHP PVSATSMINM 180 QTQSNTFANH GSGSGSMNMV YQPQFQSWQS RECLTESAVP NNSANERDDL TTRVESVGFS 240 SAYSQGILNS LTQALQSSGM DMSQASISVQ IDVGKRVASG VTSMASSSKE KEIQFTTNQV 300 IAQTGVHSYT EESD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G69010.1 | 2e-67 | bHLH family protein |