PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022758890.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family BBR-BPC
Protein Properties Length: 336aa    MW: 37226.2 Da    PI: 10.0974
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022758890.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind391.11.6e-11913361301
       GAGA_bind   1 mdddgsre..rnkg.yyepa...aslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllven 89 
                     mdd g+r+  r k+ +y+ a     +++   +q+m+++aerda+i+ernlalsekkaa+aerdmaflqrd+a+aern a+ er n++++l+++en
  XP_022758890.1   1 MDDGGHRDhgRLKTdQYRTAqgqWLMHQPSMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDAAIAERNSAIAERYNAIATLQYREN 95 
                     99****99999999899955443345556667*************************************************************** PP

       GAGA_bind  90 sla....salpvgvqvlsgtksidslqq.lse.pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkv 178
                     s+a    s++p+g+q+++g+k++++ qq +++ p++++ +++ re++ +++lp++ +++ea ++++ k      ++ke k  +++kk +k+ kkv
  XP_022758890.1  96 SSAsgnmSSCPPGCQISRGAKHMQHPQQnVHHlPHISEASYNSREMHSSDTLPVTPSTSEAAKSRQGK------RAKEAKLIAPNKKASKPPKKV 184
                     99899999********************76779********************887666665555544......445555555555555555556 PP

       GAGA_bind 179 kkesader.............................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPL 244
                     k+e++d +                             +k+ +k ++l+ln+v++D+st+P+P+CsCtG +rqCYkWG+GGWqS+CCttt+S+yPL
  XP_022758890.1 185 KRENEDLNkimfgkshewkggqdvggggddlnkqlvtTKSVWKVQELGLNQVAFDDSTMPPPICSCTGFPRQCYKWGSGGWQSSCCTTTLSMYPL 279
                     6666553336666678899**************************************************************************** PP

       GAGA_bind 245 PvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     P+ +++r+aR++grKmS++af+klL++LaaeG+dlsnpvDLkdhWAkHGtn+++ti+
  XP_022758890.1 280 PALPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK 336
                     ********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MDDGGHRDHG RLKTDQYRTA QGQWLMHQPS MKQIMAIMAE RDAAIQERNL ALSEKKAAIA  60
ERDMAFLQRD AAIAERNSAI AERYNAIATL QYRENSSASG NMSSCPPGCQ ISRGAKHMQH  120
PQQNVHHLPH ISEASYNSRE MHSSDTLPVT PSTSEAAKSR QGKRAKEAKL IAPNKKASKP  180
PKKVKRENED LNKIMFGKSH EWKGGQDVGG GGDDLNKQLV TTKSVWKVQE LGLNQVAFDD  240
STMPPPICSC TGFPRQCYKW GSGGWQSSCC TTTLSMYPLP ALPNKRHARV GGRKMSGSAF  300
NKLLSRLAAE GHDLSNPVDL KDHWAKHGTN RYITIK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175183KKASKPPKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-149BBR-BPC family protein