PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022758849.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HB-other

Protein Properties

Length: 1200aa MW: 135268 Da PI: 8.2256

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022758849.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.2	2.5e-07	47	82	22	57
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +yp+++e+e A+ lgLt +qVk WF +R ++k+ XP_022758849.1 47 VKYPTQREMEGYAAALGLTLKQVKGWFVEKRRRDKR 82 79*******************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1200 aa Download sequence
MIKPKTLLAV SKIFGTLSSL SPTLPISCFF FFFTSYLSLS RFLQTNVKYP TQREMEGYAA 60 ALGLTLKQVK GWFVEKRRRD KRDNGIIIPI HSMEKLPAPK ERNAAGISAV RKNPKGRDLL 120 VHNRSNSGAV LYSRYKSIFS ENRFGKKKKK ILLPQDLLSP QYILKKVFRK DGPPLGVEFD 180 SLPSRSFFHC KDSHPADQDC QRGATKRRKV SEFTTLDYQN NSNESAPMKK HGIGKGLMTV 240 WRVVNPEGGN IPTGVDFSNH EIVPQTSSPT VQKQPPRNKR RQPLVSLMKS ADCNLPFQKQ 300 RSLKKKLQEK RKPSIKRREV QSNKDDNHRQ PHKEKCDLAL EGSISNELLD QLAMLVDDEE 360 LELRELQAGP NPLTCTDHLG TNGVLGCSLC KDLLAKFPPN SVKMKQPFSM QPWDSSPETV 420 KKLFKVFHFL YTYSVTLDIC SFALDEFAQA FHDKDSLLLG KIHVSLLKLL LCDIEAELSA 480 SLLPHFSLSC KFLALLHSVE NQEFLVKFWK TSLNPLTWTE ILRQVLVAAG FGSKQGLLRR 540 EALSKEMSLM ARYGLSHGSL KGELFKILSE RGNNGLTVSD LALSLPVTEL NLTSTTEELN 600 ELICSTLSSD ITLFEKISPT AYRLRTSSVA KDRYECHSDT EDSGSVDDDS DNSSGSSSSD 660 NSECDSGNYY QRKLKHKNHH KSKNNMLTVY TEIDESHPGE VWLLGLMDGE YSDLSIVEKL 720 NALVALIDLL SAGSSIRMEN PGKAIAECGP NIPHYGSGAK IKRSSSSRQK FPRPSWVYGG 780 QKNGAQEAHA SLDSQPVDSS SISKFFGKGK CSSSGKDAKE TEVGVDIHPM QSVFLGSDRR 840 YNSYWLFLGP CNAYDPGHRR IYFESSEDGH WEVIDTEEAL RALLAVLDDR GKREAFLIES 900 LEKREASLCQ EMSSRHLYDA GIRRMPSDSS EMYVVREDSS SPVSDVDNLS LTVAVNESLT 960 SCGAIVLEAG KKGEEQNRKW KRLQEFDVWI WDCFYMNLNA VKHSKRSYLD SLTRCESCHD 1020 LYWRDEKHCR ICHTTFELDF DLEERYAIHV ATCREKGDNS TFPKFKVLPS QLQSLKAAVH 1080 AIESVMPEDA LIGAWTKSAH RLWVKRLRRT SSLSELLQVV ADFVAAINEN WLNQCHIEQG 1140 GCTAIEEIIA FFPTMPQTSS AVALWLVKLD EFIAPYLKKV HSEKELENET RCSGRRAPKE

Sequence ? help Back to Top

Protein Sequence Length: 1200 aa Download sequence

MIKPKTLLAV SKIFGTLSSL SPTLPISCFF FFFTSYLSLS RFLQTNVKYP TQREMEGYAA  60
ALGLTLKQVK GWFVEKRRRD KRDNGIIIPI HSMEKLPAPK ERNAAGISAV RKNPKGRDLL  120
VHNRSNSGAV LYSRYKSIFS ENRFGKKKKK ILLPQDLLSP QYILKKVFRK DGPPLGVEFD  180
SLPSRSFFHC KDSHPADQDC QRGATKRRKV SEFTTLDYQN NSNESAPMKK HGIGKGLMTV  240
WRVVNPEGGN IPTGVDFSNH EIVPQTSSPT VQKQPPRNKR RQPLVSLMKS ADCNLPFQKQ  300
RSLKKKLQEK RKPSIKRREV QSNKDDNHRQ PHKEKCDLAL EGSISNELLD QLAMLVDDEE  360
LELRELQAGP NPLTCTDHLG TNGVLGCSLC KDLLAKFPPN SVKMKQPFSM QPWDSSPETV  420
KKLFKVFHFL YTYSVTLDIC SFALDEFAQA FHDKDSLLLG KIHVSLLKLL LCDIEAELSA  480
SLLPHFSLSC KFLALLHSVE NQEFLVKFWK TSLNPLTWTE ILRQVLVAAG FGSKQGLLRR  540
EALSKEMSLM ARYGLSHGSL KGELFKILSE RGNNGLTVSD LALSLPVTEL NLTSTTEELN  600
ELICSTLSSD ITLFEKISPT AYRLRTSSVA KDRYECHSDT EDSGSVDDDS DNSSGSSSSD  660
NSECDSGNYY QRKLKHKNHH KSKNNMLTVY TEIDESHPGE VWLLGLMDGE YSDLSIVEKL  720
NALVALIDLL SAGSSIRMEN PGKAIAECGP NIPHYGSGAK IKRSSSSRQK FPRPSWVYGG  780
QKNGAQEAHA SLDSQPVDSS SISKFFGKGK CSSSGKDAKE TEVGVDIHPM QSVFLGSDRR  840
YNSYWLFLGP CNAYDPGHRR IYFESSEDGH WEVIDTEEAL RALLAVLDDR GKREAFLIES  900
LEKREASLCQ EMSSRHLYDA GIRRMPSDSS EMYVVREDSS SPVSDVDNLS LTVAVNESLT  960
SCGAIVLEAG KKGEEQNRKW KRLQEFDVWI WDCFYMNLNA VKHSKRSYLD SLTRCESCHD  1020
LYWRDEKHCR ICHTTFELDF DLEERYAIHV ATCREKGDNS TFPKFKVLPS QLQSLKAAVH  1080
AIESVMPEDA LIGAWTKSAH RLWVKRLRRT SSLSELLQVV ADFVAAINEN WLNQCHIEQG  1140
GCTAIEEIIA FFPTMPQTSS AVALWLVKLD EFIAPYLKKV HSEKELENET RCSGRRAPKE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	146	170	KKKKKILLPQDLLSPQYILKKVFRK
2	147	171	KKKKKILLPQDLLSPQYILKKVFRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	0.0	HB-other family protein