PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022758847.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HB-other

Protein Properties

Length: 1224aa MW: 138144 Da PI: 8.1092

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022758847.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	36	1.2e-11	57	106	8	57
-HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 8 tkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++ ql++Le+++e +yp+++e+e A+ lgLt +qVk WF +R ++k+ XP_022758847.1 57 SSLQLQALESFYEDVKYPTQREMEGYAAALGLTLKQVKGWFVEKRRRDKR 106 678********************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1224 aa Download sequence
MIKPKTLLAV SKIFGTLSSL SPTLPISCFF FFFTSYLSLS RFLQTSYENV LEMKRKSSLQ 60 LQALESFYED VKYPTQREME GYAAALGLTL KQVKGWFVEK RRRDKRDNGI IIPIHSMEKL 120 PAPKERNAAG ISAVRKNPKG RDLLVHNRSN SGAVLYSRYK SIFSENRFGK KKKKILLPQD 180 LLSPQYILKK VFRKDGPPLG VEFDSLPSRS FFHCKDSHPA DQDCQRGATK RRKVSEFTTL 240 DYQNNSNESA PMKKHGIGKG LMTVWRVVNP EGGNIPTGVD FSNHEIVPQT SSPTVQKQPP 300 RNKRRQPLVS LMKSADCNLP FQKQRSLKKK LQEKRKPSIK RREVQSNKDD NHRQPHKEKC 360 DLALEGSISN ELLDQLAMLV DDEELELREL QAGPNPLTCT DHLGTNGVLG CSLCKDLLAK 420 FPPNSVKMKQ PFSMQPWDSS PETVKKLFKV FHFLYTYSVT LDICSFALDE FAQAFHDKDS 480 LLLGKIHVSL LKLLLCDIEA ELSASLLPHF SLSCKFLALL HSVENQEFLV KFWKTSLNPL 540 TWTEILRQVL VAAGFGSKQG LLRREALSKE MSLMARYGLS HGSLKGELFK ILSERGNNGL 600 TVSDLALSLP VTELNLTSTT EELNELICST LSSDITLFEK ISPTAYRLRT SSVAKDRYEC 660 HSDTEDSGSV DDDSDNSSGS SSSDNSECDS GNYYQRKLKH KNHHKSKNNM LTVYTEIDES 720 HPGEVWLLGL MDGEYSDLSI VEKLNALVAL IDLLSAGSSI RMENPGKAIA ECGPNIPHYG 780 SGAKIKRSSS SRQKFPRPSW VYGGQKNGAQ EAHASLDSQP VDSSSISKFF GKGKCSSSGK 840 DAKETEVGVD IHPMQSVFLG SDRRYNSYWL FLGPCNAYDP GHRRIYFESS EDGHWEVIDT 900 EEALRALLAV LDDRGKREAF LIESLEKREA SLCQEMSSRH LYDAGIRRMP SDSSEMYVVR 960 EDSSSPVSDV DNLSLTVAVN ESLTSCGAIV LEAGKKGEEQ NRKWKRLQEF DVWIWDCFYM 1020 NLNAVKHSKR SYLDSLTRCE SCHDLYWRDE KHCRICHTTF ELDFDLEERY AIHVATCREK 1080 GDNSTFPKFK VLPSQLQSLK AAVHAIESVM PEDALIGAWT KSAHRLWVKR LRRTSSLSEL 1140 LQVVADFVAA INENWLNQCH IEQGGCTAIE EIIAFFPTMP QTSSAVALWL VKLDEFIAPY 1200 LKKVHSEKEL ENETRCSGRR APKE

Sequence ? help Back to Top

Protein Sequence Length: 1224 aa Download sequence

MIKPKTLLAV SKIFGTLSSL SPTLPISCFF FFFTSYLSLS RFLQTSYENV LEMKRKSSLQ  60
LQALESFYED VKYPTQREME GYAAALGLTL KQVKGWFVEK RRRDKRDNGI IIPIHSMEKL  120
PAPKERNAAG ISAVRKNPKG RDLLVHNRSN SGAVLYSRYK SIFSENRFGK KKKKILLPQD  180
LLSPQYILKK VFRKDGPPLG VEFDSLPSRS FFHCKDSHPA DQDCQRGATK RRKVSEFTTL  240
DYQNNSNESA PMKKHGIGKG LMTVWRVVNP EGGNIPTGVD FSNHEIVPQT SSPTVQKQPP  300
RNKRRQPLVS LMKSADCNLP FQKQRSLKKK LQEKRKPSIK RREVQSNKDD NHRQPHKEKC  360
DLALEGSISN ELLDQLAMLV DDEELELREL QAGPNPLTCT DHLGTNGVLG CSLCKDLLAK  420
FPPNSVKMKQ PFSMQPWDSS PETVKKLFKV FHFLYTYSVT LDICSFALDE FAQAFHDKDS  480
LLLGKIHVSL LKLLLCDIEA ELSASLLPHF SLSCKFLALL HSVENQEFLV KFWKTSLNPL  540
TWTEILRQVL VAAGFGSKQG LLRREALSKE MSLMARYGLS HGSLKGELFK ILSERGNNGL  600
TVSDLALSLP VTELNLTSTT EELNELICST LSSDITLFEK ISPTAYRLRT SSVAKDRYEC  660
HSDTEDSGSV DDDSDNSSGS SSSDNSECDS GNYYQRKLKH KNHHKSKNNM LTVYTEIDES  720
HPGEVWLLGL MDGEYSDLSI VEKLNALVAL IDLLSAGSSI RMENPGKAIA ECGPNIPHYG  780
SGAKIKRSSS SRQKFPRPSW VYGGQKNGAQ EAHASLDSQP VDSSSISKFF GKGKCSSSGK  840
DAKETEVGVD IHPMQSVFLG SDRRYNSYWL FLGPCNAYDP GHRRIYFESS EDGHWEVIDT  900
EEALRALLAV LDDRGKREAF LIESLEKREA SLCQEMSSRH LYDAGIRRMP SDSSEMYVVR  960
EDSSSPVSDV DNLSLTVAVN ESLTSCGAIV LEAGKKGEEQ NRKWKRLQEF DVWIWDCFYM  1020
NLNAVKHSKR SYLDSLTRCE SCHDLYWRDE KHCRICHTTF ELDFDLEERY AIHVATCREK  1080
GDNSTFPKFK VLPSQLQSLK AAVHAIESVM PEDALIGAWT KSAHRLWVKR LRRTSSLSEL  1140
LQVVADFVAA INENWLNQCH IEQGGCTAIE EIIAFFPTMP QTSSAVALWL VKLDEFIAPY  1200
LKKVHSEKEL ENETRCSGRR APKE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	170	194	KKKKKILLPQDLLSPQYILKKVFRK
2	171	195	KKKKKILLPQDLLSPQYILKKVFRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	0.0	HB-other family protein