PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022758286.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 437aa MW: 48315.3 Da PI: 9.3473

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022758286.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.2e-05	76	98	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022758286.1 76 FVCEICNKGFQRDQNLQLHRRGH 98 89*******************88 PP
2	zf-C2H2	12.4	0.00048	152	174	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ XP_022758286.1 152 WKCEKCSKIYAVQSDWKAHSKTC 174 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MFPAAMSNST SLSEEASFSS GTRVEDFGRL NPIVSTISPQ QQPEKIKKKR SLPGNPDPDA 60 EVIALSPKTL LATNRFVCEI CNKGFQRDQN LQLHRRGHNL PWKLKQRNSK EIKKRAYVCP 120 EPTCVHHHPL RALGDLTGIK KHYCRKHGEK KWKCEKCSKI YAVQSDWKAH SKTCGTREYR 180 CDCGTLFSRK DSFVTHRAFC DALAEETARL SANQLASTAT TNPALHHLTS HSNPNSSSPF 240 PFQSHISLHP WVDPTQTSNP NPNNPLHVRP ETLHFAPFFQ EPPPPPKALI TSPFQNLHVN 300 NNPSSNAAMS ATPHLSATAL LQKAATVGPI ASQINNYNTN NNNMSSHLSP EFLGFTAGNL 360 ATWQKSCERF TRDFLGLTGD HHHNGGGNGN VNVSMNVSDV LAYAGGVELR HLGRDPSQLK 420 PQRFGFAEPA SETWGGC

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MFPAAMSNST SLSEEASFSS GTRVEDFGRL NPIVSTISPQ QQPEKIKKKR SLPGNPDPDA  60
EVIALSPKTL LATNRFVCEI CNKGFQRDQN LQLHRRGHNL PWKLKQRNSK EIKKRAYVCP  120
EPTCVHHHPL RALGDLTGIK KHYCRKHGEK KWKCEKCSKI YAVQSDWKAH SKTCGTREYR  180
CDCGTLFSRK DSFVTHRAFC DALAEETARL SANQLASTAT TNPALHHLTS HSNPNSSSPF  240
PFQSHISLHP WVDPTQTSNP NPNNPLHVRP ETLHFAPFFQ EPPPPPKALI TSPFQNLHVN  300
NNPSSNAAMS ATPHLSATAL LQKAATVGPI ASQINNYNTN NNNMSSHLSP EFLGFTAGNL  360
ATWQKSCERF TRDFLGLTGD HHHNGGGNGN VNVSMNVSDV LAYAGGVELR HLGRDPSQLK  420
PQRFGFAEPA SETWGGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02670.1	1e-117	C2H2 family protein