PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022758200.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 693aa MW: 77581.6 Da PI: 5.1177

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022758200.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	46.4	7.3e-15	479	525	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f+ Lr+l+P +K++Ka+iL ++eY+k+L+ XP_022758200.1 479 NHVLAERRRREKLNERFFILRSLVPFV-----TKMDKASILGDTIEYVKQLR 525 7999********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 693 aa Download sequence
MAAPPSSRLQ NMLQTAVQSV QWTYSLFWQI CPQQGILIWS DGYYNGAIKT RKTVQPMEVS 60 AEEASLQRSQ QLRELYESLS AGETNQPARR PCAALSPEDL TETEWFYLMC VSFSFPPAVG 120 LPGKAYARRQ HVWLAGANEV DSKTFSRAIL AKSARIQTVL CIPLLDGVVE LGTTEKVQEN 180 LGLVQRVKTF FSDQSHNANP PPPKPALSEH STSNPATSSD HTRFHSSSLP PMYAAGDPPV 240 NDNQEDDDEE EVEEENDDDD EEEPESDSAE TGRNSSQVPA QITQAAVAAA GEPSELMQLD 300 MSEDIRLGSP DDASNNLDSD FHMLAVSQSG KQADQQRRAD SFRAETSRRW QMLQEPMSNN 360 FQPTSSGPQP LDELSREDTH YSQTVSTILQ GQPTRWAESS STGYATYSTQ SAFAKWTTRS 420 DHHIHVAVEG MSQWLLKYIL FTVPFLHGKY RDENSPKSRD TDAAARFRKG TPQDELSANH 480 VLAERRRREK LNERFFILRS LVPFVTKMDK ASILGDTIEY VKQLRKKIQE LETQNRRMEA 540 ENERSRSADS LQRPSSLKDQ RNGVTVSERT RSLGPGPGPD KRKMRIVEGN DGGTKPKTAE 600 SPPQATVETS VEVSIIESDA LLELQCGYRE GLLLDIMQML REQLRIEITA VQSCLNNGVF 660 VAELRAKVKD REKGKKVSIM EVKAAINQII PRF

Sequence ? help Back to Top

Protein Sequence Length: 693 aa Download sequence

MAAPPSSRLQ NMLQTAVQSV QWTYSLFWQI CPQQGILIWS DGYYNGAIKT RKTVQPMEVS  60
AEEASLQRSQ QLRELYESLS AGETNQPARR PCAALSPEDL TETEWFYLMC VSFSFPPAVG  120
LPGKAYARRQ HVWLAGANEV DSKTFSRAIL AKSARIQTVL CIPLLDGVVE LGTTEKVQEN  180
LGLVQRVKTF FSDQSHNANP PPPKPALSEH STSNPATSSD HTRFHSSSLP PMYAAGDPPV  240
NDNQEDDDEE EVEEENDDDD EEEPESDSAE TGRNSSQVPA QITQAAVAAA GEPSELMQLD  300
MSEDIRLGSP DDASNNLDSD FHMLAVSQSG KQADQQRRAD SFRAETSRRW QMLQEPMSNN  360
FQPTSSGPQP LDELSREDTH YSQTVSTILQ GQPTRWAESS STGYATYSTQ SAFAKWTTRS  420
DHHIHVAVEG MSQWLLKYIL FTVPFLHGKY RDENSPKSRD TDAAARFRKG TPQDELSANH  480
VLAERRRREK LNERFFILRS LVPFVTKMDK ASILGDTIEY VKQLRKKIQE LETQNRRMEA  540
ENERSRSADS LQRPSSLKDQ RNGVTVSERT RSLGPGPGPD KRKMRIVEGN DGGTKPKTAE  600
SPPQATVETS VEVSIIESDA LLELQCGYRE GLLLDIMQML REQLRIEITA VQSCLNNGVF  660
VAELRAKVKD REKGKKVSIM EVKAAINQII PRF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	484	489	ERRRRE
2	485	490	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	1e-106	bHLH family protein