PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022758098.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARF
Protein Properties Length: 651aa    MW: 73282.2 Da    PI: 7.5089
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022758098.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.41.4e-2383185199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f k+ltpsd++++g +++pk++a++          +++ +++l+  d++g +W +++i+r++++r++lt+GW+ Fv +++L +gD ++F   + +
  XP_022758098.1  83 FSKKLTPSDTNAHGGFCIPKRHADDGclppldmA-QQTPQQELVAIDLHGFEWHFRHIFRGQPKRHLLTSGWSTFVTSKKLVSGDAFIFL--RGE 174
                     88*********************888*****963.4445569************************************************..449 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     ++el+v+v+r+
  XP_022758098.1 175 NGELRVGVRRA 185
                     999*****996 PP
2Auxin_resp107.81.2e-35210292183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a ha+st+s+F+v+Y+P++s+seF++++++++k+ +  +++G+Rf+m+fe++++ e+r  Gt+++++d+d +rWpnSkWr+Lk
  XP_022758098.1 210 ALHAFSTRSMFTVYYRPWTSSSEFIIPLDQYMKSAQLDYCIGTRFRMQFEGKECGEKRALGTIISIEDVDHIRWPNSKWRCLK 292
                     679******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 651 aa     Download sequence    
MACVLQTTKI EAYMNEDGTM EMPIYNLPSK ILCRVVHVQL KAEPGTDEVF AQIVLLPEAE  60
QDELSVEHRN YQALPRKAYS RFFSKKLTPS DTNAHGGFCI PKRHADDGCL PPLDMAQQTP  120
QQELVAIDLH GFEWHFRHIF RGQPKRHLLT SGWSTFVTSK KLVSGDAFIF LRGENGELRV  180
GVRRAMTTLN NTSTSVISGH SMRHGILASA LHAFSTRSMF TVYYRPWTSS SEFIIPLDQY  240
MKSAQLDYCI GTRFRMQFEG KECGEKRALG TIISIEDVDH IRWPNSKWRC LKVKWDPTSV  300
AVLHPERLCP WNIDAMEFTN KKKPIILNCP KAARTDDASS PGFSSLLMDG MWHGSVKYES  360
QSSSGVLQGQ EDSDTDANRS SALRQPLPHF LPLNPSWASI QQQMENQLEI QIPVCNSFYQ  420
CTSSTTLFSG GNVASLGLHN KWPPTFSCYG VHDNALASRK VRVPNVNSME WRTLERRNES  480
KTPLCQPNGG HSYMLFGVNL VHGPPELPSP QVVTSSELGS LCSIPPTSQS SVSEPSKGRS  540
STQCKNCCSV SNRSCNKVLK YGTALGRSVD LTRFNGYEDL ICEIDHMFDF KGRLIDGSSD  600
WHVTFTDDEG DMMLIGDYPW QKFQYEVRRM LICPKEEINR LNPSSPNSTS H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.31e-132ARF family protein