PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022758042.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C2H2
Protein Properties Length: 563aa    MW: 61486.5 Da    PI: 8.6886
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022758042.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2171.6e-0591113123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C+k F r  nL+ H r H
  XP_022758042.1  91 FVCEICNKGFQRDQNLQLHRRGH 113
                     89*******************88 PP

2zf-C2H215.45.2e-05167189123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     +kC +C+k +  +s+ k H++t+
  XP_022758042.1 167 WKCDKCSKKYAVQSDWKAHQKTC 189
                     58*******************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 563 aa     Download sequence    
MSNISGDDGS FSSGNTGEEV QQLEQKQQKQ QLQNNFPGSG SGPSGASNSN DSTSQQPQQA  60
AKKKRNLPGT PDPNAEVIAL SPTTLMATNR FVCEICNKGF QRDQNLQLHR RGHNLPWKLR  120
QRSTTEVRKR VYICPEPTCV HHNPGRALGD LTGIKKHFSR KHGEKKWKCD KCSKKYAVQS  180
DWKAHQKTCG TREYKCDCGT IFSRRDSFIT HRAFCDALAE ENNKVNQGLM NNMGSNLQNQ  240
MPEIMSSMPT SNANTTMGIS DFNNFDPKNP LKSLHQELVP MPFKSMNMGG GMFSSSSGTL  300
FGGPRSISSA SSSLQLSSNS SSGFNYLQDS KNGFQIAGLN HMSATALLQK AAQMGATASN  360
SINSPMMQKS FASGMAGLDQ SIRASSFSGI QQQNTSYDQF PSQTDQSSMV GINEGGFSNP  420
VMQKSPNEMA QLFNAASGSS AMNDMGMFTS MFINGADRNQ GLMKNLEHED SGNSSLLQGR  480
TQAMERNPTG PSIFGASSAA SNMTTLDLLG MGGSRSVNLQ EQQHKQQRFE LEAISQQRLP  540
MINPFQQQLS YGDSAIEEPI WDV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66730.11e-101C2H2 family protein