PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022758042.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 563aa MW: 61486.5 Da PI: 8.6886 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17 | 1.6e-05 | 91 | 113 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022758042.1 91 FVCEICNKGFQRDQNLQLHRRGH 113 89*******************88 PP | |||||||
2 | zf-C2H2 | 15.4 | 5.2e-05 | 167 | 189 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H++t+ XP_022758042.1 167 WKCDKCSKKYAVQSDWKAHQKTC 189 58*******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 563 aa Download sequence |
MSNISGDDGS FSSGNTGEEV QQLEQKQQKQ QLQNNFPGSG SGPSGASNSN DSTSQQPQQA 60 AKKKRNLPGT PDPNAEVIAL SPTTLMATNR FVCEICNKGF QRDQNLQLHR RGHNLPWKLR 120 QRSTTEVRKR VYICPEPTCV HHNPGRALGD LTGIKKHFSR KHGEKKWKCD KCSKKYAVQS 180 DWKAHQKTCG TREYKCDCGT IFSRRDSFIT HRAFCDALAE ENNKVNQGLM NNMGSNLQNQ 240 MPEIMSSMPT SNANTTMGIS DFNNFDPKNP LKSLHQELVP MPFKSMNMGG GMFSSSSGTL 300 FGGPRSISSA SSSLQLSSNS SSGFNYLQDS KNGFQIAGLN HMSATALLQK AAQMGATASN 360 SINSPMMQKS FASGMAGLDQ SIRASSFSGI QQQNTSYDQF PSQTDQSSMV GINEGGFSNP 420 VMQKSPNEMA QLFNAASGSS AMNDMGMFTS MFINGADRNQ GLMKNLEHED SGNSSLLQGR 480 TQAMERNPTG PSIFGASSAA SNMTTLDLLG MGGSRSVNLQ EQQHKQQRFE LEAISQQRLP 540 MINPFQQQLS YGDSAIEEPI WDV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66730.1 | 1e-101 | C2H2 family protein |