PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022758039.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HB-other

Protein Properties

Length: 1019aa MW: 112432 Da PI: 9.5105

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022758039.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	18.2	4.3e-06	69	125	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +r+R ++++ ++ ++++F + +s++e +e+++ g+t +qV+ +F +R++ +k XP_022758039.1 69 KRPRDLLNPKAVKYMQAVFSIKDVISKKESREISALFGVTVTQVRDFFSSQRTRVRK 125 799***************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1019 aa Download sequence
MDVLKENLSE LEIGGTVESL QKFIDFQREL FHSQIDQLQN VVVTQCKLTG VNPLAQEMAA 60 GALSIKIGKR PRDLLNPKAV KYMQAVFSIK DVISKKESRE ISALFGVTVT QVRDFFSSQR 120 TRVRKQVRLS REKAVRSNAC KVAEEGVVPI GSDAMIPVEP VPLNSVGPAN AEEAPSCLTQ 180 DDALTGIDEL DKHFVENIFS KMRKEETFSG QVKLMEWILQ IQNPSVLCWF LNQGGVMILA 240 TWLSQAAVEE QTTVLFIILK VLCHLPLQKT LPEHMSAILQ SVNKLRLYRF SDISNRARLL 300 ISRWSKMFVR SQAVKKPNGL RTSTEAQNEM LLKQSISEIM GDDSWQANVD NSEGILATSN 360 VRKLESSQVL KLLPASTDDS TKKNILGVSG SYSRERRKVQ LVEQPGQKMA GKNSQITRTV 420 PLSQSRPMSA DDIQKAKMRA LFMQSKHGKT GSSNGMVEAK SEGLNKPSTS QASFSPRVSK 480 VPSRPAEEQK KPNTSPKTSN RLELLDPKQT MDSKESPWEK CQKIKIPWYT PPEIKLNDLW 540 RVGAGESSKE VDVQKNRNSR EKETFYYTNQ EIPSNPKEPW DREMDYDDTL TPEIPTEQPP 600 DTDCMETQVT HGEHVNSAVT LAPSSQIGGG VEAEPDLELL AVLLKNPALV FALTSGQSGN 660 LTSADTVKLL DMIKAGNSND TGKKVGEKVE MSLPSPTPSN NPGTSGWRPE VVRNPFSQQA 720 QMGNRAAQPS LGVGTTTPVA ERVPATSMAA PQQVANGPSL AQQLAAAMVQ SLPQSNAMTP 780 EKRQSTNFAF SHHGLPSNSP AIQPTASDIA LTMKNQSLVN SLTNLSAAAG PSLRVGTRSN 840 VKPASISMTP NVPEKMHSSF SMSPLMPTQS RPQMPPQLRP QQPHVSDPPL QTHLYSSRPP 900 VGNISPMSDP WRARQSLASN PHSQANQNNY NASFGGPVQP QLLSGLLGEG NEYVGNEGFE 960 SWSPENSPKR SSEHVQGRNY LEPGMNSAWT YRPDRSWQGN SPEYRDQNRQ GNRRWRDSR

Sequence ? help Back to Top

Protein Sequence Length: 1019 aa Download sequence

MDVLKENLSE LEIGGTVESL QKFIDFQREL FHSQIDQLQN VVVTQCKLTG VNPLAQEMAA  60
GALSIKIGKR PRDLLNPKAV KYMQAVFSIK DVISKKESRE ISALFGVTVT QVRDFFSSQR  120
TRVRKQVRLS REKAVRSNAC KVAEEGVVPI GSDAMIPVEP VPLNSVGPAN AEEAPSCLTQ  180
DDALTGIDEL DKHFVENIFS KMRKEETFSG QVKLMEWILQ IQNPSVLCWF LNQGGVMILA  240
TWLSQAAVEE QTTVLFIILK VLCHLPLQKT LPEHMSAILQ SVNKLRLYRF SDISNRARLL  300
ISRWSKMFVR SQAVKKPNGL RTSTEAQNEM LLKQSISEIM GDDSWQANVD NSEGILATSN  360
VRKLESSQVL KLLPASTDDS TKKNILGVSG SYSRERRKVQ LVEQPGQKMA GKNSQITRTV  420
PLSQSRPMSA DDIQKAKMRA LFMQSKHGKT GSSNGMVEAK SEGLNKPSTS QASFSPRVSK  480
VPSRPAEEQK KPNTSPKTSN RLELLDPKQT MDSKESPWEK CQKIKIPWYT PPEIKLNDLW  540
RVGAGESSKE VDVQKNRNSR EKETFYYTNQ EIPSNPKEPW DREMDYDDTL TPEIPTEQPP  600
DTDCMETQVT HGEHVNSAVT LAPSSQIGGG VEAEPDLELL AVLLKNPALV FALTSGQSGN  660
LTSADTVKLL DMIKAGNSND TGKKVGEKVE MSLPSPTPSN NPGTSGWRPE VVRNPFSQQA  720
QMGNRAAQPS LGVGTTTPVA ERVPATSMAA PQQVANGPSL AQQLAAAMVQ SLPQSNAMTP  780
EKRQSTNFAF SHHGLPSNSP AIQPTASDIA LTMKNQSLVN SLTNLSAAAG PSLRVGTRSN  840
VKPASISMTP NVPEKMHSSF SMSPLMPTQS RPQMPPQLRP QQPHVSDPPL QTHLYSSRPP  900
VGNISPMSDP WRARQSLASN PHSQANQNNY NASFGGPVQP QLLSGLLGEG NEYVGNEGFE  960
SWSPENSPKR SSEHVQGRNY LEPGMNSAWT YRPDRSWQGN SPEYRDQNRQ GNRRWRDSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	0.0	HB-other family protein