PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022757651.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | ARR-B | ||||||||
Protein Properties | Length: 556aa MW: 62449.5 Da PI: 6.4019 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 82.2 | 5.8e-26 | 317 | 370 | 2 | 56 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 +++WtpeLH++Fv++v+qL G+++A+P++ilelmkv+ Lt+++v+SHLQkYR++ XP_022757651.1 317 LKVDWTPELHKKFVQVVDQL-GIDQAIPSRILELMKVEHLTRHNVASHLQKYRMH 370 5899****************.********************************96 PP | |||||||
2 | Myb_DNA-binding | 38.5 | 2.7e-12 | 319 | 368 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++v++v qlG + +++I + m +++t+ ++ s++qky+ XP_022757651.1 319 VDWTPELHKKFVQVVDQLGIDqaIPSRILELMKvEHLTRHNVASHLQKYR 368 57***********************************************7 PP | |||||||
3 | Response_reg | 24 | 1.9e-09 | 20 | 126 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+ d++ + + +++ le +y +v ++++ +ea + + +++ ++ ++m + +G+ ++ +++++ lp i+ + +++ +++ +G XP_022757651.1 20 VLLLDEDSNSAAEIKSKLEAMDY-IVYTFSNEDEAFSAVSSRPesFHVAIVEVSMNNNNGS--FRFLEAAK-GLPTIMTSNIHCISTMMKCIALG 110 7899999999999**********.***************666666***************7..55565555.9****9999999*********** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a +fl Kp +++l++ XP_022757651.1 111 AVEFLRKPLCEDKLRN 126 *********9999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 556 aa Download sequence |
MISTTNDFSA WKDFPKGLGV LLLDEDSNSA AEIKSKLEAM DYIVYTFSNE DEAFSAVSSR 60 PESFHVAIVE VSMNNNNGSF RFLEAAKGLP TIMTSNIHCI STMMKCIALG AVEFLRKPLC 120 EDKLRNIWQH VVHKAFNAKG NDLSESLKPV KESVISMLDL QLENGKSKNE DWDKTEDATM 180 IQENDCEPLL ESGKYPAPST PQLEQGGRLL GDGDCQDHTN YSTEKEGGEL DGESKSVETT 240 DENAIAEVTA PVGQPQGRME TLLKEEADIV DGTKGKNTYF HSQNRVNSKD SHADAEKQST 300 VSGLHNSCLN KANRKKLKVD WTPELHKKFV QVVDQLGIDQ AIPSRILELM KVEHLTRHNV 360 ASHLQKYRMH RRHILPKEDD RRWPQRDQTQ RSYPHKLIMA FQPYHSNHVI PVGPLYPIWG 420 APPHPASIQT HGYPPWQPTE SWHWKPFPGV QADAWGCPVI PPPRGYCSTF TQDNMQNACG 480 LHCSRTMDNR SGMPQIFVEH QPAEEVIDKV VKEAINKPWL PLPLGLKPPS TDSVLAELSR 540 QRIAIISPHV NGSNYC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18020.3 | 1e-147 | ARR-B family protein |