PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022757220.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 813aa    MW: 88302.4 Da    PI: 6.3725
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022757220.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.91.1e-20113168156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++eLe+lF+++++p++++r eL+k+l L++rqVk+WFqNrR+++k
  XP_022757220.1 113 KKRYHRHTAQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 168
                     688999***********************************************999 PP
2START202.81.4e-633225461206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela++a++elvkka+ +ep+W +s     e++n +e+l++f++  +     +  ea+r++g+v+ ++  lve+l+d++ +W e+++    + +t 
  XP_022757220.1 322 ELALAAMDELVKKAQTDEPLWIRSLeggrEILNHEEYLRTFTPCIGmkpsgFVAEASRETGLVIINSLALVETLMDSN-RWAEMFPcmiaRTSTA 415
                     5899**************************************9998999999**************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                      vissg      galqlm aelq+lsplvp R+  f+R+++q+ +g+w++vdvS+d  ++ +    +v +++lpSg+++++++ng+skvtwveh+
  XP_022757220.1 416 GVISSGmggtrnGALQLMHAELQVLSPLVPvREANFLRFCKQHAEGVWAVVDVSIDTIRETSGATAFVNCRRLPSGCVVQDMPNGYSKVTWVEHA 510
                     ************************************************************999******************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     +++++++h+l+r+l++sg+ +ga++wvatlqrqce+
  XP_022757220.1 511 EYDESQVHQLYRPLLSSGMGFGAQRWVATLQRQCEC 546
                     **********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 813 aa     Download sequence    
MSFGGFLDNS SGGGLGGARV VADMPYSNNM PTGAIASRFV SPLPKSMFNS PGLSLALQPN  60
IDNQGDGTRM GENFERTVGR RSREEEHESR SGSDNMDGAS GDDQDAADNP PRKKRYHRHT  120
AQQIQELEAL FKECPHPDEK QRLELSKRLC LETRQVKFWF QNRRTQMKTQ LERHENSLLR  180
QENDKLRAEN MSIRDAMRNP ICTNCGGPAI IGDISLEEQH LRIENARLKD ELDRVCALAG  240
KFLGRPISAL TNSIAPPLPN SSLELGVGSN GFGGLSTVAT TLPLGPDFGV GLTNALPVVA  300
PNRPITGVTG LDRSVERSMF LELALAAMDE LVKKAQTDEP LWIRSLEGGR EILNHEEYLR  360
TFTPCIGMKP SGFVAEASRE TGLVIINSLA LVETLMDSNR WAEMFPCMIA RTSTAGVISS  420
GMGGTRNGAL QLMHAELQVL SPLVPVREAN FLRFCKQHAE GVWAVVDVSI DTIRETSGAT  480
AFVNCRRLPS GCVVQDMPNG YSKVTWVEHA EYDESQVHQL YRPLLSSGMG FGAQRWVATL  540
QRQCECLAIL MSSVPTRDHT AITASGRRSM LKLAQRMTDN FCAGVCASTV HKWNKLNAGN  600
VDEDVRVMTR KSIDDPGEPP GIVLSAATSV WLPVSPQRLF DFLRDERLRS EWDILSNGGP  660
MQEMAHIAKG QDHGNCVSLL RASAMNSNQS SMLILQETCI DAAGSLVVYA PVDIPAMHVV  720
MNGGDSAYVA LLPSGFAIVP DGPGSRGPAS NEHINGNAGG GSQRVGGSLL TVAFQILVNS  780
LPTAKLTVES VETVNNLISC TVQKIKAALQ CES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein