PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022757219.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 814aa    MW: 88430.5 Da    PI: 6.3725
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022757219.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.91.1e-20114169156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++eLe+lF+++++p++++r eL+k+l L++rqVk+WFqNrR+++k
  XP_022757219.1 114 KKRYHRHTAQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 169
                     688999***********************************************999 PP
2START202.81.4e-633235471206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela++a++elvkka+ +ep+W +s     e++n +e+l++f++  +     +  ea+r++g+v+ ++  lve+l+d++ +W e+++    + +t 
  XP_022757219.1 323 ELALAAMDELVKKAQTDEPLWIRSLeggrEILNHEEYLRTFTPCIGmkpsgFVAEASRETGLVIINSLALVETLMDSN-RWAEMFPcmiaRTSTA 416
                     5899**************************************9998999999**************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                      vissg      galqlm aelq+lsplvp R+  f+R+++q+ +g+w++vdvS+d  ++ +    +v +++lpSg+++++++ng+skvtwveh+
  XP_022757219.1 417 GVISSGmggtrnGALQLMHAELQVLSPLVPvREANFLRFCKQHAEGVWAVVDVSIDTIRETSGATAFVNCRRLPSGCVVQDMPNGYSKVTWVEHA 511
                     ************************************************************999******************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     +++++++h+l+r+l++sg+ +ga++wvatlqrqce+
  XP_022757219.1 512 EYDESQVHQLYRPLLSSGMGFGAQRWVATLQRQCEC 547
                     **********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 814 aa     Download sequence    
MSFGGFLDNS SGGGLGGARV VADMPYSNNM PTGAIASRFV SPLPKSMFNS PGLSLALQQP  60
NIDNQGDGTR MGENFERTVG RRSREEEHES RSGSDNMDGA SGDDQDAADN PPRKKRYHRH  120
TAQQIQELEA LFKECPHPDE KQRLELSKRL CLETRQVKFW FQNRRTQMKT QLERHENSLL  180
RQENDKLRAE NMSIRDAMRN PICTNCGGPA IIGDISLEEQ HLRIENARLK DELDRVCALA  240
GKFLGRPISA LTNSIAPPLP NSSLELGVGS NGFGGLSTVA TTLPLGPDFG VGLTNALPVV  300
APNRPITGVT GLDRSVERSM FLELALAAMD ELVKKAQTDE PLWIRSLEGG REILNHEEYL  360
RTFTPCIGMK PSGFVAEASR ETGLVIINSL ALVETLMDSN RWAEMFPCMI ARTSTAGVIS  420
SGMGGTRNGA LQLMHAELQV LSPLVPVREA NFLRFCKQHA EGVWAVVDVS IDTIRETSGA  480
TAFVNCRRLP SGCVVQDMPN GYSKVTWVEH AEYDESQVHQ LYRPLLSSGM GFGAQRWVAT  540
LQRQCECLAI LMSSVPTRDH TAITASGRRS MLKLAQRMTD NFCAGVCAST VHKWNKLNAG  600
NVDEDVRVMT RKSIDDPGEP PGIVLSAATS VWLPVSPQRL FDFLRDERLR SEWDILSNGG  660
PMQEMAHIAK GQDHGNCVSL LRASAMNSNQ SSMLILQETC IDAAGSLVVY APVDIPAMHV  720
VMNGGDSAYV ALLPSGFAIV PDGPGSRGPA SNEHINGNAG GGSQRVGGSL LTVAFQILVN  780
SLPTAKLTVE SVETVNNLIS CTVQKIKAAL QCES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein