PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022757103.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 238aa MW: 24670 Da PI: 7.9575 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 129.3 | 1.7e-40 | 30 | 130 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkC+++C++apyf +eq +++fa+vhk+FGasnv+kll ++p ++r da+ +++yeA+ r+rdPvyG+v++i++lqqq+ +l+ael XP_022757103.1 30 PCGACKFLRRKCVPGCIFAPYFDSEQgAAHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQTRLRDPVYGCVAHIFALQQQVVNLQAEL 124 7***********************9989******************************************************************* PP DUF260 95 allkee 100 ++l+++ XP_022757103.1 125 SYLQAH 130 *99986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 238 aa Download sequence |
MSAKPSSSGG SVGGGAGSCS SGGGGGGGGP CGACKFLRRK CVPGCIFAPY FDSEQGAAHF 60 AAVHKVFGAS NVSKLLLHIP VHKRLDAVVT ICYEAQTRLR DPVYGCVAHI FALQQQVVNL 120 QAELSYLQAH LATLELPSPP PPPQPQTLMA PPPLSISDLP SASSVPATYD LSSLFDPMVQ 180 PSWAMQQRQI DPRQFGGSGS SSSTGCGDLQ ALARELLHRQ GSPQLPCTDA SSSPSLSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G45420.1 | 2e-81 | LBD family protein |