PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022757026.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 735aa    MW: 80195.5 Da    PI: 5.0713
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022757026.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS336.45.3e-1033787342374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     +++L+++Ae +++g+  laq +Larl+++ sp g+p+ R+a+yf+eAL+  l        +a ++s+ s++n + ++ a+k fse+sPi++f+++
  XP_022757026.1 378 IDQLIQAAELIETGNPVLAQGILARLNQQLSPVGKPFIRAAFYFKEALQLLLRL------NATNASALSTYNLIFKIGAYKSFSEISPIIQFANF 466
                     689**********************************************99987......8899999999************************* PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl.e 190
                     t+Nqa+le +eg++r+HiiDfdi++G+QW++L+q+L  R++g psl+iT+++sp+++++ el  t+++L++fA+e+++ fe++++  ++l++   
  XP_022757026.1 467 TCNQALLEVFEGCSRIHIIDFDIGYGGQWASLMQELVLRNGGGPSLKITAFASPSTHDELELGFTQDNLKHFASEINMAFEIEIISLESLNSGsW 561
                     ************************************************************************************96666665523 PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     +  L++ ++Ea+aVnl +  ++ +      +s+ + vL++vk+lsPk+vv  ++ +d+++ sF +++++al+ ys l++sl+a    + ++ +k+
  XP_022757026.1 562 PLPLHLPENEAIAVNLPVGSFSNY------PSALPLVLRFVKQLSPKIVVSLDRGCDRTDVSFPHHIIHALQSYSGLLESLDAV-NMNLDALQKI 649
                     56789999**********888777......555667*********************************************776.4567999*** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     Er+ll++ i+++v  ++ +     e+   Wr+ + ++GF+p+++s+++++qa++l+++++ +g++ve+++ slvl+W++r+L+++SaWr
  XP_022757026.1 650 ERFLLQPGIEKIVLGRHGS----LERTPAWRSLFIQSGFSPLTFSNFTESQAECLIQRTPIRGFHVEKRQSSLVLCWQRRELIAASAWR 734
                     **************98888....89999************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 735 aa     Download sequence    
MKAMPLPFEE FQGKGALDFS SSTSSFSDSA LFLQNQHHQQ LQEKWQNNKE GCCYVGIEPT  60
SVLDTRSPSP PTSSSTLSSS LGGSGGGAAS TDTTGVAAKA AVSGNNSSSS NNNNNNNNSQ  120
SVDIGTEKCG LSMEDWESVL SGSPSQEQSI LRLIMGDIED PSMGLNRILQ SDGGSQDVEF  180
NAGFGVVDQG FTFESITGGG NLVSNIDPPL TVSCSDFTRL GTVSTPTNPV FTSSPQNLLP  240
TSLPPGVFAQ QQLQPLEALD EKPQIYNPQV IINQNQAQFT QNPAMFLPLS YAQLQEHHLL  300
SPPPPPPPKR LNSGSSVPNY QVPKVPFSGS GQELYLRRQQ QQLQMLQQSP TTIGMTASTK  360
QKIVNDELAN QQLQQAIIDQ LIQAAELIET GNPVLAQGIL ARLNQQLSPV GKPFIRAAFY  420
FKEALQLLLR LNATNASALS TYNLIFKIGA YKSFSEISPI IQFANFTCNQ ALLEVFEGCS  480
RIHIIDFDIG YGGQWASLMQ ELVLRNGGGP SLKITAFASP STHDELELGF TQDNLKHFAS  540
EINMAFEIEI ISLESLNSGS WPLPLHLPEN EAIAVNLPVG SFSNYPSALP LVLRFVKQLS  600
PKIVVSLDRG CDRTDVSFPH HIIHALQSYS GLLESLDAVN MNLDALQKIE RFLLQPGIEK  660
IVLGRHGSLE RTPAWRSLFI QSGFSPLTFS NFTESQAECL IQRTPIRGFH VEKRQSSLVL  720
CWQRRELIAA SAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-156GRAS family protein