PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756986.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 357aa MW: 40665.3 Da PI: 6.1675

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756986.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.1	0.0013	4	26	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC C ksF + L H+r+H XP_022756986.1 4 HKCRLCLKSFANGRALGGHMRSH 26 79********************9 PP
2	zf-C2H2	14.2	0.00013	227	249	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+F++ L H +H XP_022756986.1 227 YRCETCNKVFKSYQALGGHRASH 249 9************9999998887 PP
3	zf-C2H2	11.4	0.00096	280	302	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C ++Fs+ L H r+H XP_022756986.1 280 HECPVCFRVFSSGQALGGHKRSH 302 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MEKHKCRLCL KSFANGRALG GHMRSHMLNL PIPRKVEEPE RPDVPTDHPS YESEAASASY 60 SSSSSEEEGE EKGQFYGLRE NPKRSIRMVD PEFVDAGSVV LQDRESETES SKNPTRRRSK 120 RTRKILEHHQ QKRQEQQEET KKLKVNINQL SKTESWAEPE PVSSISDTTT EEDVAFCLMM 180 LSRDQWKSKV HEDEEEETEI EKSMEETDES EEYFKLSKVN RTTRSKYRCE TCNKVFKSYQ 240 ALGGHRASHK KIKTYSPATH ETDLDPENVG TCSITEKKIH ECPVCFRVFS SGQALGGHKR 300 SHVTGQVVAT METPVKSSKK LGDSWIDLNL PAPMDDDDVS QIELSAVSDA EFVNHIK

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MEKHKCRLCL KSFANGRALG GHMRSHMLNL PIPRKVEEPE RPDVPTDHPS YESEAASASY  60
SSSSSEEEGE EKGQFYGLRE NPKRSIRMVD PEFVDAGSVV LQDRESETES SKNPTRRRSK  120
RTRKILEHHQ QKRQEQQEET KKLKVNINQL SKTESWAEPE PVSSISDTTT EEDVAFCLMM  180
LSRDQWKSKV HEDEEEETEI EKSMEETDES EEYFKLSKVN RTTRSKYRCE TCNKVFKSYQ  240
ALGGHRASHK KIKTYSPATH ETDLDPENVG TCSITEKKIH ECPVCFRVFS SGQALGGHKR  300
SHVTGQVVAT METPVKSSKK LGDSWIDLNL PAPMDDDDVS QIELSAVSDA EFVNHIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	7e-72	C2H2 family protein