PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756891.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 376aa MW: 41771 Da PI: 9.8584

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756891.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	68.2	1.7e-21	55	146	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqlea 87 +W+++e+ aLi+a+r+++ +lrrg+lk+++W+ev++++ ++++qC++k+e+l+kry+ + +++++ s+ s++++f++++a XP_022756891.1 55 CWSHDETVALIDAYRDKWYTLRRGNLKATHWQEVADAVarrcPMATPPKTAVQCRHKMEKLRKRYRTEIQRARSMpISRFISSWVHFKRMDA 146 7**********************************964432233489*********************966999********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MLNPSSPSPQ QDLPSNTSPP PSEPPLALPA PPTSTSTPSA TTTVTPNPRR LPPPCWSHDE 60 TVALIDAYRD KWYTLRRGNL KATHWQEVAD AVARRCPMAT PPKTAVQCRH KMEKLRKRYR 120 TEIQRARSMP ISRFISSWVH FKRMDAMEKG PNVKSDYNSD SPDEENDEDE EDDQDQDFYE 180 DGYKNGSVNT RSVQKLYRNG IRNSGGSVSG SGGGSGGSSG GFRIRIPTVV SIAQPGPRFY 240 GKMDQKYGAN PTSNPQPTAN PHPNKGNFGV SGSGSAYGTR VLRGFEETPG KVAASGKRER 300 DAVTEMVSAI KVLGDGFVRM EQMKMEMARE IETMRMEMEM KRTEMILESQ QRIVEAFAKA 360 VSERKKKPKR MPSPES

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MLNPSSPSPQ QDLPSNTSPP PSEPPLALPA PPTSTSTPSA TTTVTPNPRR LPPPCWSHDE  60
TVALIDAYRD KWYTLRRGNL KATHWQEVAD AVARRCPMAT PPKTAVQCRH KMEKLRKRYR  120
TEIQRARSMP ISRFISSWVH FKRMDAMEKG PNVKSDYNSD SPDEENDEDE EDDQDQDFYE  180
DGYKNGSVNT RSVQKLYRNG IRNSGGSVSG SGGGSGGSSG GFRIRIPTVV SIAQPGPRFY  240
GKMDQKYGAN PTSNPQPTAN PHPNKGNFGV SGSGSAYGTR VLRGFEETPG KVAASGKRER  300
DAVTEMVSAI KVLGDGFVRM EQMKMEMARE IETMRMEMEM KRTEMILESQ QRIVEAFAKA  360
VSERKKKPKR MPSPES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	3e-83	Trihelix family protein