PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756546.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 616aa MW: 67380.4 Da PI: 7.4935

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756546.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	46.6	8.7e-15	250	309	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022756546.1 250 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 309 57*****************666664477446***********************98 PP
2	AP2	46.9	6.8e-15	352	403	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022756546.1 352 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 403 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 616 aa Download sequence
MRLLFLSLAT SISVSSSASL SSFHFLSHGF IDSLFLLLLL VVPLFPKTKN NSYLLLISLS 60 SFEIFVRQGD TMDMNMGSMD SSSSTQNWLA FSLSNHRQQQ HLNLPSSTSH LCLFEAFTTS 120 TTIATPATTN SSAEEDAGAG AGTTVGATDL SMFNGGPKLE DFLGGSSTTT GAGAAPQQQL 180 PHHHFATETP VTVSDTEIYD SELKTIAASF LRGFSSEQTD TRKQRQQKQQ VPASEPAPRR 240 ALDTFGQRTS IYRGVTRHRW TGRYEAHLWD NSCRREGQSR KGRQVYLGGY DKEEKAARAY 300 DLAALKYWGA TTTTNFPIST YEKELEEMKN MTRQEFVASL RRKSSGFSRG ASIYRGVTRH 360 HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDIAAIK FRGLNAVTNF DMSRYDVKSI 420 VNSNLPIGGL GNKTKNCSDS ASDSKSTDDD RDHSSASSAV TFAAQPAPSS TLSFAVPIKQ 480 DPSDYWSSIF GYNNSTASLS SAKNPSLFHQ PSNNGSGFQS PTDFNMDFGG NSTVNESINN 540 GLFNVGGYVQ QQQQQQQQTS TSSLPFATPI VLNNSVNNNY EGSSGYGSWN IAQSLQSYQT 600 AKPSLSVFQT PIFGME

Sequence ? help Back to Top

Protein Sequence Length: 616 aa Download sequence

MRLLFLSLAT SISVSSSASL SSFHFLSHGF IDSLFLLLLL VVPLFPKTKN NSYLLLISLS  60
SFEIFVRQGD TMDMNMGSMD SSSSTQNWLA FSLSNHRQQQ HLNLPSSTSH LCLFEAFTTS  120
TTIATPATTN SSAEEDAGAG AGTTVGATDL SMFNGGPKLE DFLGGSSTTT GAGAAPQQQL  180
PHHHFATETP VTVSDTEIYD SELKTIAASF LRGFSSEQTD TRKQRQQKQQ VPASEPAPRR  240
ALDTFGQRTS IYRGVTRHRW TGRYEAHLWD NSCRREGQSR KGRQVYLGGY DKEEKAARAY  300
DLAALKYWGA TTTTNFPIST YEKELEEMKN MTRQEFVASL RRKSSGFSRG ASIYRGVTRH  360
HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDIAAIK FRGLNAVTNF DMSRYDVKSI  420
VNSNLPIGGL GNKTKNCSDS ASDSKSTDDD RDHSSASSAV TFAAQPAPSS TLSFAVPIKQ  480
DPSDYWSSIF GYNNSTASLS SAKNPSLFHQ PSNNGSGFQS PTDFNMDFGG NSTVNESINN  540
GLFNVGGYVQ QQQQQQQQTS TSSLPFATPI VLNNSVNNNY EGSSGYGSWN IAQSLQSYQT  600
AKPSLSVFQT PIFGME

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57390.1	1e-151	AP2 family protein