PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756513.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 366aa MW: 41602.1 Da PI: 7.5571

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756513.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	49.4	1.1e-15	49	108	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n k+ ++++lg ++ +e Aa a++ a++k++g XP_022756513.1 49 SIYRGVTRHRWTGRYEAHLWDkNCWNEsqnKKgRQVYLGAYDDEEAAAHAYDLAALKYWG 108 57*****************999955656446***********************98 PP
2	AP2	51.2	3.1e-16	151	202	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g XP_022756513.1 151 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 202 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MAKLSQQNQK NNGQSNINNN FSNTTSNGVT KVKRTRRSVQ RDSPPQRSSI YRGVTRHRWT 60 GRYEAHLWDK NCWNESQNKK GRQVYLGAYD DEEAAAHAYD LAALKYWGQD TILNFPLSTY 120 QKELKEMEDQ SREEYIGSLR RKSSGFSRGV SKYRGVARHH HNGRWEARIG RVFGNKYLYL 180 GTYATQEEAA TAYDMAAIEY RGLNAVTNFD LSRYIKWLKP NQTNADSNPN HSPNIDTITA 240 TTSTVTPNPN QELNLSFFGN NNQQLQASSV PNETVLTQPR PVNATSALGL LLQSSKFKEM 300 MEMTSAEDHC QLTPLVSEPM QCSFPEDIQT YFECQYSSSY VEAGADIIFG ELNSFIPPMF 360 QCDLDA

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MAKLSQQNQK NNGQSNINNN FSNTTSNGVT KVKRTRRSVQ RDSPPQRSSI YRGVTRHRWT  60
GRYEAHLWDK NCWNESQNKK GRQVYLGAYD DEEAAAHAYD LAALKYWGQD TILNFPLSTY  120
QKELKEMEDQ SREEYIGSLR RKSSGFSRGV SKYRGVARHH HNGRWEARIG RVFGNKYLYL  180
GTYATQEEAA TAYDMAAIEY RGLNAVTNFD LSRYIKWLKP NQTNADSNPN HSPNIDTITA  240
TTSTVTPNPN QELNLSFFGN NNQQLQASSV PNETVLTQPR PVNATSALGL LLQSSKFKEM  300
MEMTSAEDHC QLTPLVSEPM QCSFPEDIQT YFECQYSSSY VEAGADIIFG ELNSFIPPMF  360
QCDLDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	1e-106	AP2 family protein