PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022756386.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 227aa MW: 25309.5 Da PI: 4.5386 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.4 | 1.7e-18 | 23 | 73 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+ykGVr +k +g+Wv+eIr p++ r r++lg++++ae+Aa+a +aa +l+g XP_022756386.1 23 SKYKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDSAEKAARAFDAALYCLRG 73 89*****999.**********933...5*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 227 aa Download sequence |
MKPTCGQSST SPTEHVSDTS NSSKYKGVRK RKWGKWVSEI RLPNSRERIW LGSYDSAEKA 60 ARAFDAALYC LRGRDAKFNF PDNPPEIVGG RSLSPQEIQV VAARFANEVE ADRIQGNNKD 120 NTNISSNESH LRYNNNNVWT EQYTSSSSMS ASDGGAATQV EGHEMIDWSS FLSMLDTNQG 180 MPDYGFYPGL DHFPGDQLIY PPATDDNLDD DQNGGDDLSQ SSFLWNF |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 26 | 32 | KGVRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G19210.1 | 1e-50 | ERF family protein |