PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022756367.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 534aa MW: 57512.6 Da PI: 8.9553 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.9 | 3.6e-05 | 80 | 102 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H XP_022756367.1 80 FICEICNKGFQRDQNLELHRRGH 102 89******************988 PP | |||||||
2 | zf-C2H2 | 12.4 | 0.00048 | 156 | 178 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H + + XP_022756367.1 156 WKCEKCSKRYAVQSDWKAHSKIC 178 58*****************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 534 aa Download sequence |
MMKDLVEDES ISNLTSTSGE VSASSGTRIE TGTMYPQHSF PSTNQAAPPP KKKRNLPGNA 60 DPGSEVIALS PMTLLTTNRF ICEICNKGFQ RDQNLELHRR GHNLPWKLKQ RTNKEVRKKV 120 YVCPETTCVH HDPSRALGDL TAIKKHFCRK HGEKKWKCEK CSKRYAVQSD WKAHSKICGT 180 TEYRCDCGTL FSRRDSFITH RAFCDALAKE SARATTAANP VLLSSVSHMT KLQTLPHNHA 240 LQARSMKREQ DHLFTARVPA ADSIPPWLAC PPGVGAGPGP PSINLSSSPL HLDNPVAQNE 300 NPSQNSGCNT LPPFQARTAS LHMSAAAILQ KAAQMDVTMS KPLQSPVGMQ RPHHHQAHMS 360 GTTGFIGSTS FPLSGSSLGL SAREELGSSF PYGLASFGNK AAVTSGFMEQ VIATNSTAGA 420 GAGAAPPDSL LHDMMSSLSS TSGFDGSSPF EQSFTGIWNT KGNSINFQET TNHLSKTIES 480 QLSRSDHEGR GSSSGSSKIG GNDGLTRDFL GLKALPHSDF PNLAGLNHLN SSSE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 107 | 119 | KLKQRTNKEVRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G55110.1 | 1e-111 | C2H2 family protein |