PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022756355.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C3H
Protein Properties Length: 381aa    MW: 42877.6 Da    PI: 8.1169
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022756355.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.93.6e-08144164526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C++f++ G Ck Gd+C FaHg
  XP_022756355.1 144 ACPDFRK-GNCKKGDSCEFAHG 164
                     6******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
MQFITKRTAP PLRIRERCPK MMIRELIRPN PTVEIPKWDP FNDLMANFPS VSYNCNEPNS  60
PCPVDYLASI HCCLPSNDFE TDSLTEESDL PVDAFSCDHF RMYEFKVRRC ARSRSHDWTE  120
CPYAHPGEKA RRRDPRKLPY SGNACPDFRK GNCKKGDSCE FAHGVFECWL HPARYRTQPC  180
KDGTSCTRRV CFFAHTPEQL RVLPQRSPRG SGSGSGDLDY VSSPLRHRLD FVSSPTSILA  240
SPPISPPSDS PPMSPSGSFN LVSQLAASMR NCKLDKAKII DTCSLGLQRG SSFGSPRCSA  300
LRPGFCSSPS TPTRTLIRPR LGRFDHWECN AFEEEPAMER VESGRDLRAR MYAKLSEENS  360
LDRLDPAASG PDVGWVSELV M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.11e-111C3H family protein