PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022756310.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 269aa MW: 29576.1 Da PI: 8.1735 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.5 | 0.00021 | 90 | 112 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H XP_022756310.1 90 FSCNYCQRKFYSSQALGGHQNAH 112 89*****************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 269 aa Download sequence |
MESLRKEPSP SESTSCIVST PEAPPGPDEV LTDREREAKP CLQLDLNLTT SDCDRGFNLE 60 LNLIDSLNTG SFDSTAPETP RPTDGEQRVF SCNYCQRKFY SSQALGGHQN AHKRERTLAK 120 RGQRMGAHIA AASATAFGHP YFHHNHYSSL ASLPLHGAYN RSLGIQVHSM IHKPSHISSS 180 TGFGNVYGHH SWSRPPIDQQ PAIGKLSMEN SHAIATGATS RASVGRFNIM RKMMGSPADE 240 MISNCWWSGG ASMKTRQEEI QKVDLSLKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10970.1 | 2e-60 | C2H2 family protein |