PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022756304.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family CO-like
Protein Properties Length: 335aa    MW: 37309.8 Da    PI: 6.8257
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022756304.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box27.95e-09436436
        zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg 36
                    + C+ +++  ++lfC+ ++ +lC +C +++H  
  XP_022756304.1  4 KLCDSCKSATATLFCRPDSAFLCSNCDSKIHAA 36
                    68*****************************54 PP
2zf-B_box27.94.8e-094691342
        zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
                     ++C+ +e+ +++  C+ +   lC +C   +H+       H++vpl
  XP_022756304.1 46 VWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSAnplarrHQRVPL 91
                    689*****************************66899999*99986 PP
3CCT70.15.6e-24272315144
             CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                     Rea++lRY+eK+k+RkFeK+irY+sRKa+Ae RpR+KGrFvk++
  XP_022756304.1 272 REARVLRYREKKKNRKFEKTIRYASRKAYAEMRPRIKGRFVKRT 315
                     9*****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MASKLCDSCK SATATLFCRP DSAFLCSNCD SKIHAANKLA SRHARVWVCE VCEQAPAHVT  60
CKADAAALCV TCDRDIHSAN PLARRHQRVP LTPFYDSVNS VPPVKPNGAY NFLDERYFSD  120
RDGDAVVSTE EAEAASWLLP NPNHKVVESA DVNTAQYVFS EMDPYLDLEY GPVDPKIEAQ  180
EQNSSGTDGV VPVQRKGVQA PLANDHCYDM DFTGSKPFAY GYNPHCLSHS VSSSSLDVGV  240
VPEGSTMMDI SDPYGRWAES THQTLQLSSA DREARVLRYR EKKKNRKFEK TIRYASRKAY  300
AEMRPRIKGR FVKRTDIEVE VERSNMYGFG AVPSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24930.11e-148CO-like family protein