PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022756268.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | AP2 | ||||||||
Protein Properties | Length: 545aa MW: 60351.3 Da PI: 6.6052 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47 | 6.3e-15 | 165 | 224 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022756268.1 165 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 224 57*******************666664477446*************************98 PP | |||||||
2 | AP2 | 47.1 | 5.9e-15 | 269 | 318 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g XP_022756268.1 269 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 318 9***************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 545 aa Download sequence |
MNSNNWLSFP LSPTNPSLPT HLHSSQSHQL NLGLVNGSME HPFHAQEWNL INTNDTSEVP 60 KVSDFLGVSK SESPSLDLAA FNEIHQANDS DYPFQNNSIM PVQNNVVAAN NNYEFQENAN 120 NLQSLTLSMG SGSKGSTCET SGENSTNIVE APPRRTLDTF GQRTSIYRGV TRHRWTGRYE 180 AHLWDNSCRR EGQSRKGRQV YLGGYDKEEK AARAYDLAAL KYWGTSTTTN FPISNYEKEL 240 EEMKHMTRQE FVAAIRRKSS GFSRGASMYR GVTRHHQHGR WQARIGRVAG NKDLYLGTFS 300 TEEEAAEAYD IAAIKFRGLN AVTNFDMSRY DVKAILESNT LPIGGGAAKR LKEAQALESS 360 RKREEMIALG SSFQYGSSSS SRLQAYPLLQ VPFEQPQPLL TLQNHDINSQ HTQDSSSFHQ 420 NYIQTQLQLH QQSGSYNLHQ SSQNSQFYNS YIQNNPALLH GLMNMGCSSP SVVDNNGSFT 480 GSYSGGYLGN GIGMASNSTA GNAVGSTEEL ALVKVDYDMP SEGYGGWSGE SVQGSNPGVF 540 TMWND |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51190.1 | 0.0 | AP2 family protein |