PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756167.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SRS

Protein Properties

Length: 349aa MW: 36315.2 Da PI: 8.1872

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756167.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	220.3	4e-68	135	293	3	153
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.aeaaskrkrelkskkqsalsstklssaes 96 s +a+CqdCGnqakkdC+h+RCRtCCksrgfdC thvkstWvpa++rrerq ++aaa++ a s+ +++ +k++r +++++++s+t++s++++ XP_022756167.1 135 SSGATCQDCGNQAKKDCTHRRCRTCCKSRGFDCPTHVKSTWVPATRRRERQLMAAAATTAGAGSSgSTSGAKKPRL-ITSQTTTASHTSTSNTTP 228 56789*******************************************99999988887777736666777776.5888999999**** PP DUF702 97 kkeletss........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 +++++ ss lP +v+++avf+cvrv++v+dge+e+aYq++v+igGh+fkG+LydqG+e XP_022756167.1 229 PRSFDNSSnhqgfketLPGQVRAPAVFKCVRVTAVEDGEDEYAYQAVVKIGGHIFKGLLYDQGVE 293 *99999***************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MGMVGLRDFV VVAPASSFNH HNHHHHHHAQ DPIMANDQIN GPNASTTLGV GVGVGVIPLL 60 TAAPCFPPQN VEDSDLLNNI GRNKHSVMQL WQNQNSSDFL RKPSSVPENN NSSMNLIQSS 120 GGGGMGLGNG GSGSSSGATC QDCGNQAKKD CTHRRCRTCC KSRGFDCPTH VKSTWVPATR 180 RRERQLMAAA ATTAGAGSSG STSGAKKPRL ITSQTTTASH TSTSNTTPPR SFDNSSNHQG 240 FKETLPGQVR APAVFKCVRV TAVEDGEDEY AYQAVVKIGG HIFKGLLYDQ GVEGRDGFPN 300 ISELHLGGGV GGGSGRNGGS SSPVLDPSEV YAATGGDLLG GAGFGNPIN

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MGMVGLRDFV VVAPASSFNH HNHHHHHHAQ DPIMANDQIN GPNASTTLGV GVGVGVIPLL  60
TAAPCFPPQN VEDSDLLNNI GRNKHSVMQL WQNQNSSDFL RKPSSVPENN NSSMNLIQSS  120
GGGGMGLGNG GSGSSSGATC QDCGNQAKKD CTHRRCRTCC KSRGFDCPTH VKSTWVPATR  180
RRERQLMAAA ATTAGAGSSG STSGAKKPRL ITSQTTTASH TSTSNTTPPR SFDNSSNHQG  240
FKETLPGQVR APAVFKCVRV TAVEDGEDEY AYQAVVKIGG HIFKGLLYDQ GVEGRDGFPN  300
ISELHLGGGV GGGSGRNGGS SSPVLDPSEV YAATGGDLLG GAGFGNPIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.1	2e-75	SRS family protein