PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756166.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SRS

Protein Properties

Length: 351aa MW: 36501.3 Da PI: 8.009

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756166.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	220	5e-68	135	295	3	153
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.aeaaskrkrelkskkqsalsstklssaes 96 s +a+CqdCGnqakkdC+h+RCRtCCksrgfdC thvkstWvpa++rrerq ++aaa++ a s+ +++ +k++r +++++++s+t++s++++ XP_022756166.1 135 SSGATCQDCGNQAKKDCTHRRCRTCCKSRGFDCPTHVKSTWVPATRRRERQLMAAAATTAGAGSSgSTSGAKKPRL-ITSQTTTASHTSTSNTTP 228 56789*******************************************99999988887777736666777776.5888999999**** PP DUF702 97 kkeletss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 +++++ ss lP +v+++avf+cvrv++v+dge+e+aYq++v+igGh+fkG+LydqG+e XP_022756166.1 229 PRSFDNSSnhqdagfketLPGQVRAPAVFKCVRVTAVEDGEDEYAYQAVVKIGGHIFKGLLYDQGVE 295 *99999*****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MGMVGLRDFV VVAPASSFNH HNHHHHHHAQ DPIMANDQIN GPNASTTLGV GVGVGVIPLL 60 TAAPCFPPQN VEDSDLLNNI GRNKHSVMQL WQNQNSSDFL RKPSSVPENN NSSMNLIQSS 120 GGGGMGLGNG GSGSSSGATC QDCGNQAKKD CTHRRCRTCC KSRGFDCPTH VKSTWVPATR 180 RRERQLMAAA ATTAGAGSSG STSGAKKPRL ITSQTTTASH TSTSNTTPPR SFDNSSNHQD 240 AGFKETLPGQ VRAPAVFKCV RVTAVEDGED EYAYQAVVKI GGHIFKGLLY DQGVEGRDGF 300 PNISELHLGG GVGGGSGRNG GSSSPVLDPS EVYAATGGDL LGGAGFGNPI N

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MGMVGLRDFV VVAPASSFNH HNHHHHHHAQ DPIMANDQIN GPNASTTLGV GVGVGVIPLL  60
TAAPCFPPQN VEDSDLLNNI GRNKHSVMQL WQNQNSSDFL RKPSSVPENN NSSMNLIQSS  120
GGGGMGLGNG GSGSSSGATC QDCGNQAKKD CTHRRCRTCC KSRGFDCPTH VKSTWVPATR  180
RRERQLMAAA ATTAGAGSSG STSGAKKPRL ITSQTTTASH TSTSNTTPPR SFDNSSNHQD  240
AGFKETLPGQ VRAPAVFKCV RVTAVEDGED EYAYQAVVKI GGHIFKGLLY DQGVEGRDGF  300
PNISELHLGG GVGGGSGRNG GSSSPVLDPS EVYAATGGDL LGGAGFGNPI N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.1	1e-76	SRS family protein