PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756095.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 525aa MW: 57694 Da PI: 9.5729

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756095.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14	0.00015	65	85	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+k F r nL+ H r H XP_022756095.1 65 CEICNKGFQRDQNLQLHRRGH 85 *******************88 PP
2	zf-C2H2	11.8	0.00075	139	161	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H + + XP_022756095.1 139 WKCEKCSKKYAVQSDWKAHSKIC 161 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 525 aa Download sequence
MMSQDGISVP STTGGLAQEP NPNPNPNPTA NPVKKKRNLP GTPDPDAEVI ALSPKSLMAT 60 NRFLCEICNK GFQRDQNLQL HRRGHNLPWK LKQRTNKEVR KKVYICPEKT CVHHDPSRAL 120 GDLTGIKKHF SRKHGEKKWK CEKCSKKYAV QSDWKAHSKI CGTREYRCDC GTLFSRKDSF 180 ITHRAFCDAL AEESARFTSV STTMNPAAFR NDMINGANNN AQATGMHQFS SGFRPEFAGS 240 DQLVDNLNSS GQKPRLQLWL DQANSQLNPI AIPSNANAFL APKSTSLPDL GIAPMNMFGS 300 LPQIQWLSKY PEASFPGANL SMSVLPRGPK EEEENKGDLC ESIISLYSNN SRNSLQQSHA 360 HMSATALLQK AAQMGSTRSN PAFNNSGFGL MSSSPSTMST SNTYDQNKNE IYKLCKQANQ 420 YENINELVSS LSSTQATIMK DVSALGDLNS SSFVNKTTKN MENLVMQANG KKGGQAVVSK 480 LNTNSNEVEA SLTRDFLGVG GESSRPFLQQ ELAKFASMGP VQPWS

Sequence ? help Back to Top

Protein Sequence Length: 525 aa Download sequence

MMSQDGISVP STTGGLAQEP NPNPNPNPTA NPVKKKRNLP GTPDPDAEVI ALSPKSLMAT  60
NRFLCEICNK GFQRDQNLQL HRRGHNLPWK LKQRTNKEVR KKVYICPEKT CVHHDPSRAL  120
GDLTGIKKHF SRKHGEKKWK CEKCSKKYAV QSDWKAHSKI CGTREYRCDC GTLFSRKDSF  180
ITHRAFCDAL AEESARFTSV STTMNPAAFR NDMINGANNN AQATGMHQFS SGFRPEFAGS  240
DQLVDNLNSS GQKPRLQLWL DQANSQLNPI AIPSNANAFL APKSTSLPDL GIAPMNMFGS  300
LPQIQWLSKY PEASFPGANL SMSVLPRGPK EEEENKGDLC ESIISLYSNN SRNSLQQSHA  360
HMSATALLQK AAQMGSTRSN PAFNNSGFGL MSSSPSTMST SNTYDQNKNE IYKLCKQANQ  420
YENINELVSS LSSTQATIMK DVSALGDLNS SSFVNKTTKN MENLVMQANG KKGGQAVVSK  480
LNTNSNEVEA SLTRDFLGVG GESSRPFLQQ ELAKFASMGP VQPWS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	90	102	KLKQRTNKEVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	1e-107	C2H2 family protein