PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022755974.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 355aa MW: 40178.7 Da PI: 9.0898

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022755974.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.6	2.2e-05	194	213	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 + C++C+k+F+r n++ H+ XP_022755974.1 194 FACSICSKTFNRYNNMQMHM 213 78*****************9 PP
2	zf-C2H2	14.3	0.00012	278	301	1	23
EEET.TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp.dCgksFsrksnLkrHirtH 23 + C +Cgk+F k + ++H +++ XP_022755974.1 278 FMCRkYCGKTFAVKGDWRTHEKNC 301 78******************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MKMGFRSYHV EDKNLCSQAP TFIEWLKPSS SLSSSSSSSS SSSSSSSSSS SSSSSSSVTQ 60 EVQFMNPMTI MKLPVVSFQQ QQQQDFHQLG QETIQCLPLL SRLNENKPLK EEGARIMQKE 120 MGIGNVKEEK IEKVTVSLHI GLPNSTTRDN PVVENKIFKE EEPIKKTIHG CSFNTESRFW 180 IPTPAQILVG PMQFACSICS KTFNRYNNMQ MHMWGHGSEY RKGPDSLKGT QPAAMLRLPC 240 YCCAQGCKNN INHPRAKPLK DFRTLQTHYK RKHGAKPFMC RKYCGKTFAV KGDWRTHEKN 300 CGKLWYCTCG SDFKHKRSLK DHIRSFGKGH SPYPSLEGFE DDKECITGSE DEFAH

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MKMGFRSYHV EDKNLCSQAP TFIEWLKPSS SLSSSSSSSS SSSSSSSSSS SSSSSSSVTQ  60
EVQFMNPMTI MKLPVVSFQQ QQQQDFHQLG QETIQCLPLL SRLNENKPLK EEGARIMQKE  120
MGIGNVKEEK IEKVTVSLHI GLPNSTTRDN PVVENKIFKE EEPIKKTIHG CSFNTESRFW  180
IPTPAQILVG PMQFACSICS KTFNRYNNMQ MHMWGHGSEY RKGPDSLKGT QPAAMLRLPC  240
YCCAQGCKNN INHPRAKPLK DFRTLQTHYK RKHGAKPFMC RKYCGKTFAV KGDWRTHEKN  300
CGKLWYCTCG SDFKHKRSLK DHIRSFGKGH SPYPSLEGFE DDKECITGSE DEFAH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08290.1	1e-119	C2H2 family protein