PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022755902.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 405aa MW: 45087 Da PI: 8.6701

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022755902.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	22.3	3.4e-07	231	253	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cgk F+r nL+ H+r H XP_022755902.1 231 HYCQVCGKGFKRDANLRMHMRAH 253 68*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MISSGAVSCF PNPSQGLPMY PVAAEDIVSS SLEAADSGPE ALSSSLLYNL SILKDKVRQV 60 QSLVSILISP DQTHPESTSL AIASMGSFVQ EIIVAASSMI FVCQQISLGA TSGNNTTTEL 120 HQQHVRVIPD NGISQHPNFT NNNVVQERGE GFYSRTENIS WYGDYCNNRN NNNSNSTRSL 180 QVSNDDKLER KELMAELTRR SGISKGSHRI SANNCDIIEL NAADLLAKYT HYCQVCGKGF 240 KRDANLRMHM RAHGDQYKTT AALINPMKNH EGNTAIANYS TELPKKYSCP HEGCRWNQKH 300 AKFQPLKSMI CVKNHYKRSH CPKMYVCKRC NRKQFSVLSD LRTHEKHCGD LKWQCSCGTT 360 FSRKDKLMGH VALFVGHSPV LVTDSLTKPG KLENQPTTMQ LDDRG

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MISSGAVSCF PNPSQGLPMY PVAAEDIVSS SLEAADSGPE ALSSSLLYNL SILKDKVRQV  60
QSLVSILISP DQTHPESTSL AIASMGSFVQ EIIVAASSMI FVCQQISLGA TSGNNTTTEL  120
HQQHVRVIPD NGISQHPNFT NNNVVQERGE GFYSRTENIS WYGDYCNNRN NNNSNSTRSL  180
QVSNDDKLER KELMAELTRR SGISKGSHRI SANNCDIIEL NAADLLAKYT HYCQVCGKGF  240
KRDANLRMHM RAHGDQYKTT AALINPMKNH EGNTAIANYS TELPKKYSCP HEGCRWNQKH  300
AKFQPLKSMI CVKNHYKRSH CPKMYVCKRC NRKQFSVLSD LRTHEKHCGD LKWQCSCGTT  360
FSRKDKLMGH VALFVGHSPV LVTDSLTKPG KLENQPTTMQ LDDRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22890.1	1e-106	C2H2 family protein