PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022755872.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C2H2
Protein Properties Length: 388aa    MW: 43206.8 Da    PI: 9.1632
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022755872.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.54.8e-05150173123
                     EEETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                     ++C+ Cg+ F+ ++ L++H+ t H
  XP_022755872.1 150 FPCTACGEIFPKPHFLEQHQATkH 173
                     89******************9988 PP

Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MAKTNVGSFF NKFLSLFILL LHLGCFIFTA KVHQKPAKKR KPSRLSASPD PYSHKPHKVL  60
SSTWSYLKRI FSSYKANCKN TIQTHPTTTA TTLVLASARN SQQSLISMNI PPGTLLSDSP  120
PPRHKKQSDS CPESDISTDN PFFPLRNAIF PCTACGEIFP KPHFLEQHQA TKHAVSELID  180
GDSGKNIVGI IFKTGWTDRV KNPEIHRILK IHNSTKILER FEEYRELVKA KAARNGAAGK  240
RDERCIADGN ELLRFYCSTF MCDLGLNGIS SICNQQYCSI CGIIKSGFSP KMDGISTLST  300
SWRAHLAIPE YVEEEFKFMN VKRAMLVCRV VAGRVGSEGE EIDKVDGGFD SVIVKGEGSG  360
VQKKVDEEEL LVFNPRAVLP CFVIVYTV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29660.11e-108C2H2 family protein