PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022755872.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 388aa MW: 43206.8 Da PI: 9.1632 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.5 | 4.8e-05 | 150 | 173 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ Cg+ F+ ++ L++H+ t H XP_022755872.1 150 FPCTACGEIFPKPHFLEQHQATkH 173 89******************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 388 aa Download sequence |
MAKTNVGSFF NKFLSLFILL LHLGCFIFTA KVHQKPAKKR KPSRLSASPD PYSHKPHKVL 60 SSTWSYLKRI FSSYKANCKN TIQTHPTTTA TTLVLASARN SQQSLISMNI PPGTLLSDSP 120 PPRHKKQSDS CPESDISTDN PFFPLRNAIF PCTACGEIFP KPHFLEQHQA TKHAVSELID 180 GDSGKNIVGI IFKTGWTDRV KNPEIHRILK IHNSTKILER FEEYRELVKA KAARNGAAGK 240 RDERCIADGN ELLRFYCSTF MCDLGLNGIS SICNQQYCSI CGIIKSGFSP KMDGISTLST 300 SWRAHLAIPE YVEEEFKFMN VKRAMLVCRV VAGRVGSEGE EIDKVDGGFD SVIVKGEGSG 360 VQKKVDEEEL LVFNPRAVLP CFVIVYTV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G29660.1 | 1e-108 | C2H2 family protein |