PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022755683.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 479aa MW: 52242.2 Da PI: 8.3362

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022755683.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	55.8	1.1e-17	155	204	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta+ Aa+a+++a+ k++g XP_022755683.1 155 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAQAAARAYDRAAIKFRG 204 78*****************......55**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MLDLNLNVAS IESTQGPDSA APFTSKLNEG SANQMDESGT SNSSIVNDDD ESCSTRTNGG 60 AFTLSFDILK VGSGGIEYEN DEAAVVVSKE LFPVKGVGAD FGSSEGQSSG INNNYKWINL 120 SFERKEAADP GVMQQQQQPS QTVKKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV 180 YLGGFDTAQA AARAYDRAAI KFRGLDADIN FNLGDYEDDM KQMKNLTKEE FVLILRRQST 240 GFSRGSSKYR GVTLHKCGRW EARMGQFLGK KAYDKAAIKC NGKEAVTNFE PSTYKAEMIF 300 DTSNEGNSHN LDLNLGISPP VGNGPKENEG CLHFHSGLYD MHGGKSLRAG NPAAATVGAP 360 SFKGQVGASD QPKFWNNVYP TYLPSEERAM VKRVELGHPQ SLPDWAWQMH GQVSARPMPL 420 FSTAASSGFS FSATPRAAAI LPSKPLKPTT HDLCFSSSTA NATNTPLTYF PMKPPQAPP

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MLDLNLNVAS IESTQGPDSA APFTSKLNEG SANQMDESGT SNSSIVNDDD ESCSTRTNGG  60
AFTLSFDILK VGSGGIEYEN DEAAVVVSKE LFPVKGVGAD FGSSEGQSSG INNNYKWINL  120
SFERKEAADP GVMQQQQQPS QTVKKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV  180
YLGGFDTAQA AARAYDRAAI KFRGLDADIN FNLGDYEDDM KQMKNLTKEE FVLILRRQST  240
GFSRGSSKYR GVTLHKCGRW EARMGQFLGK KAYDKAAIKC NGKEAVTNFE PSTYKAEMIF  300
DTSNEGNSHN LDLNLGISPP VGNGPKENEG CLHFHSGLYD MHGGKSLRAG NPAAATVGAP  360
SFKGQVGASD QPKFWNNVYP TYLPSEERAM VKRVELGHPQ SLPDWAWQMH GQVSARPMPL  420
FSTAASSGFS FSATPRAAAI LPSKPLKPTT HDLCFSSSTA NATNTPLTYF PMKPPQAPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.1	1e-133	AP2 family protein