PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022755682.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 494aa MW: 53970.2 Da PI: 7.8561

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022755682.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	55.8	1.2e-17	155	204	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta+ Aa+a+++a+ k++g XP_022755682.1 155 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAQAAARAYDRAAIKFRG 204 78*****************......55**********************998 PP
2	AP2	41.1	4.4e-13	247	297	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k +g XP_022755682.1 247 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEVEAARAYDKAAIKCNG 297 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MLDLNLNVAS IESTQGPDSA APFTSKLNEG SANQMDESGT SNSSIVNDDD ESCSTRTNGG 60 AFTLSFDILK VGSGGIEYEN DEAAVVVSKE LFPVKGVGAD FGSSEGQSSG INNNYKWINL 120 SFERKEAADP GVMQQQQQPS QTVKKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV 180 YLGGFDTAQA AARAYDRAAI KFRGLDADIN FNLGDYEDDM KQMKNLTKEE FVLILRRQST 240 GFSRGSSKYR GVTLHKCGRW EARMGQFLGK KYIYLGLFDS EVEAARAYDK AAIKCNGKEA 300 VTNFEPSTYK AEMIFDTSNE GNSHNLDLNL GISPPVGNGP KENEGCLHFH SGLYDMHGGK 360 SLRAGNPAAA TVGAPSFKGQ VGASDQPKFW NNVYPTYLPS EERAMVKRVE LGHPQSLPDW 420 AWQMHGQVSA RPMPLFSTAA SSGFSFSATP RAAAILPSKP LKPTTHDLCF SSSTANATNT 480 PLTYFPMKPP QAPP

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MLDLNLNVAS IESTQGPDSA APFTSKLNEG SANQMDESGT SNSSIVNDDD ESCSTRTNGG  60
AFTLSFDILK VGSGGIEYEN DEAAVVVSKE LFPVKGVGAD FGSSEGQSSG INNNYKWINL  120
SFERKEAADP GVMQQQQQPS QTVKKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV  180
YLGGFDTAQA AARAYDRAAI KFRGLDADIN FNLGDYEDDM KQMKNLTKEE FVLILRRQST  240
GFSRGSSKYR GVTLHKCGRW EARMGQFLGK KYIYLGLFDS EVEAARAYDK AAIKCNGKEA  300
VTNFEPSTYK AEMIFDTSNE GNSHNLDLNL GISPPVGNGP KENEGCLHFH SGLYDMHGGK  360
SLRAGNPAAA TVGAPSFKGQ VGASDQPKFW NNVYPTYLPS EERAMVKRVE LGHPQSLPDW  420
AWQMHGQVSA RPMPLFSTAA SSGFSFSATP RAAAILPSKP LKPTTHDLCF SSSTANATNT  480
PLTYFPMKPP QAPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	1e-144	AP2 family protein