PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022755566.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 509aa MW: 56377.3 Da PI: 8.1537

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022755566.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.4	0.00099	99	118	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C+ Cgk F ++ L Hi+ XP_022755566.1 99 VCKECGKGFQSWKALFGHIK 118 6*****************97 PP
2	zf-C2H2	11.8	0.00077	432	454	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C k+F++ L H r+H XP_022755566.1 432 HECPICLKVFPSGQALGGHKRSH 454 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 509 aa Download sequence
MEEDQEFKHV CKFCSKSFPC GRSLGGHMRS HMTTNNNSAE TDDKLIKKKL VSVKNVVNDA 60 DTETRLEAGI NGGYILRKKH KKTRRLLDSS EDTSVHDKVC KECGKGFQSW KALFGHIKCH 120 SEKERASNNS LEEQDSWTSA NQKLVMDSQS DNETAAPSKG RRSKRKTRYM CTENSSISLS 180 NHASSFMSEI EQEQEEVALC LMMLSRDVGH WAGLNSFAES SDNNSVFLEA KIGIKASICN 240 GKEVQKLKKQ KEKKLESAIV DSETFQTGGV QSEFCASELS KTWVIRVNKS ESEVSEQTGV 300 NRAQLGSNKL NSSRRKLPGR SYDPELKSGS VNKLTADVLD SEFCKDPHKR SKFECTTCSK 360 IFHSYQALGG HRASHKKING CFASRIDSSE NSIETENSPD PTADSKLVKS IGNETPIAHL 420 AADSDDKRSK GHECPICLKV FPSGQALGGH KRSHLIAQAK ENQTIVIQKP IPEIRDFLDL 480 NLPAPVEEET VFIWGSSLGG LEAATSTKH

Sequence ? help Back to Top

Protein Sequence Length: 509 aa Download sequence

MEEDQEFKHV CKFCSKSFPC GRSLGGHMRS HMTTNNNSAE TDDKLIKKKL VSVKNVVNDA  60
DTETRLEAGI NGGYILRKKH KKTRRLLDSS EDTSVHDKVC KECGKGFQSW KALFGHIKCH  120
SEKERASNNS LEEQDSWTSA NQKLVMDSQS DNETAAPSKG RRSKRKTRYM CTENSSISLS  180
NHASSFMSEI EQEQEEVALC LMMLSRDVGH WAGLNSFAES SDNNSVFLEA KIGIKASICN  240
GKEVQKLKKQ KEKKLESAIV DSETFQTGGV QSEFCASELS KTWVIRVNKS ESEVSEQTGV  300
NRAQLGSNKL NSSRRKLPGR SYDPELKSGS VNKLTADVLD SEFCKDPHKR SKFECTTCSK  360
IFHSYQALGG HRASHKKING CFASRIDSSE NSIETENSPD PTADSKLVKS IGNETPIAHL  420
AADSDDKRSK GHECPICLKV FPSGQALGGH KRSHLIAQAK ENQTIVIQKP IPEIRDFLDL  480
NLPAPVEEET VFIWGSSLGG LEAATSTKH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	4e-37	C2H2 family protein