PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022755508.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 345aa MW: 38699.3 Da PI: 6.7284

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022755508.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.6	1.4e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++l+d ++++G g+W++ +++ g+ R++k+c++rw +yl XP_022755508.1 14 RGPWTPEEDQKLLDFIQKHGHGSWRSLPEKAGLQRCGKSCRLRWINYL 61 89********************************************97 PP
2	Myb_DNA-binding	48.3	2.4e-15	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++ E++ +++++++lG++ W++Ia++++ +Rt++++k++w+++ XP_022755508.1 67 RGNFSLREQKTIIQLHALLGNR-WSAIASHLP-KRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MGRSPCCDAT GLKRGPWTPE EDQKLLDFIQ KHGHGSWRSL PEKAGLQRCG KSCRLRWINY 60 LRPDIKRGNF SLREQKTIIQ LHALLGNRWS AIASHLPKRT DNEIKNYWNT HIKKRLAMMG 120 IDPSTHKPVV AALGSANGAD PKKVSNLTHM AQWESARLEA EARLVRESSK LRQYDHQPGL 180 PGPVPTLQLK KIASRLGAPR CLDILKAWQR VQLESMVIDN NGFDQGSNNL DSPTSTLNFL 240 QNPRASSTNI ASFQSNEALF TACQDMEFEG GEAWNMGTCN IGDEDSIKWF SNLLFNGCES 300 DHFVQSNLDN DGNNGSNDAG VLSEDDEHNN YWDDIFDLVD CGHNI

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MGRSPCCDAT GLKRGPWTPE EDQKLLDFIQ KHGHGSWRSL PEKAGLQRCG KSCRLRWINY  60
LRPDIKRGNF SLREQKTIIQ LHALLGNRWS AIASHLPKRT DNEIKNYWNT HIKKRLAMMG  120
IDPSTHKPVV AALGSANGAD PKKVSNLTHM AQWESARLEA EARLVRESSK LRQYDHQPGL  180
PGPVPTLQLK KIASRLGAPR CLDILKAWQR VQLESMVIDN NGFDQGSNNL DSPTSTLNFL  240
QNPRASSTNI ASFQSNEALF TACQDMEFEG GEAWNMGTCN IGDEDSIKWF SNLLFNGCES  300
DHFVQSNLDN DGNNGSNDAG VLSEDDEHNN YWDDIFDLVD CGHNI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	3e-94	MYB family protein