PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022755393.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

CO-like

Protein Properties

Length: 367aa MW: 40694.8 Da PI: 6.13

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022755393.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.5	1.1e-07	19	52	3	36
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg 36 +r+C+++++ + +fC+ ++ ++C dC + +H g XP_022755393.1 19 ARTCDTCKSAAAAIFCHADSAFMCLDCDSRIHFG 52 589*****************************44 PP
2	zf-B_box	23.7	9.6e-08	64	108	3	41
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 ++C+ +e+ ++ C+ + lC C +H+ H++ p XP_022755393.1 64 VWMCEVCEQAPAAVTCKADAAALCVMCDADIHSAnplarrHERLP 108 689*****************************6688888898876 PP
3	CCT	69.9	6.4e-24	292	335	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eKrk+RkFeK+irY+sRKa+AesRpR+KGrF+k++ XP_022755393.1 292 REARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRT 335 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MGIEIASAKG ITGGWDMAAR TCDTCKSAAA AIFCHADSAF MCLDCDSRIH FGNDKLVSSR 60 HERVWMCEVC EQAPAAVTCK ADAAALCVMC DADIHSANPL ARRHERLPVE PFSDSADSIV 120 KSSPFSFLVP TDHNGTNCEQ EDVDLGSWFL SNPNLNHKLT METNEVKTGD LFSSEMDPFI 180 DFEYQNSFKQ HHNAAMDSVV PVQTKPATIP VINNENCFEI DFCRPKLPTF SYQTQSLTHS 240 VSSSSLEVGL VPDGNSLSDI SYPFGRTMTD LSVPISATTI NNQAPQVGGI DREARVLRYR 300 EKRKNRKFEK TIRYASRKAY AESRPRIKGR FAKRTEIDNE VDHIYKSPSA AAAAFMSDMQ 360 YSVVPSF

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MGIEIASAKG ITGGWDMAAR TCDTCKSAAA AIFCHADSAF MCLDCDSRIH FGNDKLVSSR  60
HERVWMCEVC EQAPAAVTCK ADAAALCVMC DADIHSANPL ARRHERLPVE PFSDSADSIV  120
KSSPFSFLVP TDHNGTNCEQ EDVDLGSWFL SNPNLNHKLT METNEVKTGD LFSSEMDPFI  180
DFEYQNSFKQ HHNAAMDSVV PVQTKPATIP VINNENCFEI DFCRPKLPTF SYQTQSLTHS  240
VSSSSLEVGL VPDGNSLSDI SYPFGRTMTD LSVPISATTI NNQAPQVGGI DREARVLRYR  300
EKRKNRKFEK TIRYASRKAY AESRPRIKGR FAKRTEIDNE VDHIYKSPSA AAAAFMSDMQ  360
YSVVPSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57660.1	1e-122	CO-like family protein