PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022754907.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HRT-like

Protein Properties

Length: 693aa MW: 75924.5 Da PI: 8.9922

Description

HRT-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022754907.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HRT-like	42.3	1.3e-13	272	300	1	29
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGm 29 +CG++l+d s+C+++Pv+gRK C+eHKG+ XP_022754907.1 272 TCGLLLGDDSICRKPPVEGRKMCAEHKGK 300 7***************************7 PP
2	HRT-like	52.7	6.9e-17	361	391	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv+++dGs C+rqPv gR+RC HKG++i XP_022754907.1 361 ICGVAMDDGSLCRRQPVSGRQRCDLHKGRKI 391 8***************************997 PP
3	HRT-like	49.6	6.8e-16	445	475	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv l++G +C++qP +gR RCe HKGmR+ XP_022754907.1 445 ICGVELGNGYFCTKQPGRGRDRCEDHKGMRV 475 8*****************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 693 aa Download sequence
MPMAEAILAA VDTRSKREDH HRTKDGSLFS KWKVPFKLQN LLSPLFTSKL AFNDTQTTDL 60 TKLPFSVLIG PDDWKDYSVG KEGVARYRDN RGKLDPNNDV VVYLGVADNV RRRLQQYGRT 120 GDHLGSGGSG EKASGFFEDM FSRGFSIAYR WAPMKSTADA QRMEAGRLKT YDYAWNKVSN 180 GPRRHDDILE KLDKCASNCT TQAIFSRKHP PFLQKQLGIK IKASKLLSHD NQFSKYADGE 240 SYNFLSPVFK FSRSQPRLVL DHGGSNENDT ITCGLLLGDD SICRKPPVEG RKMCAEHKGK 300 ETKGSSMRLS TSEKSQLQKA YTEHVVLDNG DFNVHGAKTP SFGLVPLLAG GNPEIEQCSP 360 ICGVAMDDGS LCRRQPVSGR QRCDLHKGRK ICSSNSKRVP YVVFDSDADE DSGFYKRSSE 420 LFIPGKVETG VAPQRPVFSK GYDTICGVEL GNGYFCTKQP GRGRDRCEDH KGMRVNSLFS 480 GLDRESTLDV SDTGSRFNPH NWNYGSSSSS KSICGATTCN GSFCQRTVKG NDRCEQHLDY 540 GGRSSSSNSG ARYSNHGGSS SSICGAPTHN GSSCQRTVMG NGRCFQHLNY DGGSSSSSSS 600 SSNFSSRYLN YGGCSTSICG APTCNGSFCQ RTVKGNGRCF QHLNYGDSSS SSSNFSSPYS 660 YYGGCSTSIC GAPTRNGSFC RRTVKGNGRC WQH

Sequence ? help Back to Top

Protein Sequence Length: 693 aa Download sequence

MPMAEAILAA VDTRSKREDH HRTKDGSLFS KWKVPFKLQN LLSPLFTSKL AFNDTQTTDL  60
TKLPFSVLIG PDDWKDYSVG KEGVARYRDN RGKLDPNNDV VVYLGVADNV RRRLQQYGRT  120
GDHLGSGGSG EKASGFFEDM FSRGFSIAYR WAPMKSTADA QRMEAGRLKT YDYAWNKVSN  180
GPRRHDDILE KLDKCASNCT TQAIFSRKHP PFLQKQLGIK IKASKLLSHD NQFSKYADGE  240
SYNFLSPVFK FSRSQPRLVL DHGGSNENDT ITCGLLLGDD SICRKPPVEG RKMCAEHKGK  300
ETKGSSMRLS TSEKSQLQKA YTEHVVLDNG DFNVHGAKTP SFGLVPLLAG GNPEIEQCSP  360
ICGVAMDDGS LCRRQPVSGR QRCDLHKGRK ICSSNSKRVP YVVFDSDADE DSGFYKRSSE  420
LFIPGKVETG VAPQRPVFSK GYDTICGVEL GNGYFCTKQP GRGRDRCEDH KGMRVNSLFS  480
GLDRESTLDV SDTGSRFNPH NWNYGSSSSS KSICGATTCN GSFCQRTVKG NDRCEQHLDY  540
GGRSSSSNSG ARYSNHGGSS SSICGAPTHN GSSCQRTVMG NGRCFQHLNY DGGSSSSSSS  600
SSNFSSRYLN YGGCSTSICG APTCNGSFCQ RTVKGNGRCF QHLNYGDSSS SSSNFSSPYS  660
YYGGCSTSIC GAPTRNGSFC RRTVKGNGRC WQH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56780.1	4e-70	HRT-like family protein