PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022754906.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HRT-like

Protein Properties

Length: 718aa MW: 78685.6 Da PI: 8.8574

Description

HRT-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022754906.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HRT-like	42.2	1.3e-13	297	325	1	29
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGm 29 +CG++l+d s+C+++Pv+gRK C+eHKG+ XP_022754906.1 297 TCGLLLGDDSICRKPPVEGRKMCAEHKGK 325 7***************************7 PP
2	HRT-like	52.7	7.2e-17	386	416	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv+++dGs C+rqPv gR+RC HKG++i XP_022754906.1 386 ICGVAMDDGSLCRRQPVSGRQRCDLHKGRKI 416 8***************************997 PP
3	HRT-like	49.5	7.1e-16	470	500	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv l++G +C++qP +gR RCe HKGmR+ XP_022754906.1 470 ICGVELGNGYFCTKQPGRGRDRCEDHKGMRV 500 8*****************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 718 aa Download sequence
MPMAEAILAA VDTRSKREDH HRTKDGSLFS KWKVPFKLQN LLSPLFTSKL AFNDTQTTDL 60 TKLPFSVLIG PDDWKDYSVG KEGVARYRCE NLPRSLEPGI YELAIYCHGS ASRDNRGKLD 120 PNNDVVVYLG VADNVRRRLQ QYGRTGDHLG SGGSGEKASG FFEDMFSRGF SIAYRWAPMK 180 STADAQRMEA GRLKTYDYAW NKVSNGPRRH DDILEKLDKC ASNCTTQAIF SRKHPPFLQK 240 QLGIKIKASK LLSHDNQFSK YADGESYNFL SPVFKFSRSQ PRLVLDHGGS NENDTITCGL 300 LLGDDSICRK PPVEGRKMCA EHKGKETKGS SMRLSTSEKS QLQKAYTEHV VLDNGDFNVH 360 GAKTPSFGLV PLLAGGNPEI EQCSPICGVA MDDGSLCRRQ PVSGRQRCDL HKGRKICSSN 420 SKRVPYVVFD SDADEDSGFY KRSSELFIPG KVETGVAPQR PVFSKGYDTI CGVELGNGYF 480 CTKQPGRGRD RCEDHKGMRV NSLFSGLDRE STLDVSDTGS RFNPHNWNYG SSSSSKSICG 540 ATTCNGSFCQ RTVKGNDRCE QHLDYGGRSS SSNSGARYSN HGGSSSSICG APTHNGSSCQ 600 RTVMGNGRCF QHLNYDGGSS SSSSSSSNFS SRYLNYGGCS TSICGAPTCN GSFCQRTVKG 660 NGRCFQHLNY GDSSSSSSNF SSPYSYYGGC STSICGAPTR NGSFCRRTVK GNGRCWQH

Sequence ? help Back to Top

Protein Sequence Length: 718 aa Download sequence

MPMAEAILAA VDTRSKREDH HRTKDGSLFS KWKVPFKLQN LLSPLFTSKL AFNDTQTTDL  60
TKLPFSVLIG PDDWKDYSVG KEGVARYRCE NLPRSLEPGI YELAIYCHGS ASRDNRGKLD  120
PNNDVVVYLG VADNVRRRLQ QYGRTGDHLG SGGSGEKASG FFEDMFSRGF SIAYRWAPMK  180
STADAQRMEA GRLKTYDYAW NKVSNGPRRH DDILEKLDKC ASNCTTQAIF SRKHPPFLQK  240
QLGIKIKASK LLSHDNQFSK YADGESYNFL SPVFKFSRSQ PRLVLDHGGS NENDTITCGL  300
LLGDDSICRK PPVEGRKMCA EHKGKETKGS SMRLSTSEKS QLQKAYTEHV VLDNGDFNVH  360
GAKTPSFGLV PLLAGGNPEI EQCSPICGVA MDDGSLCRRQ PVSGRQRCDL HKGRKICSSN  420
SKRVPYVVFD SDADEDSGFY KRSSELFIPG KVETGVAPQR PVFSKGYDTI CGVELGNGYF  480
CTKQPGRGRD RCEDHKGMRV NSLFSGLDRE STLDVSDTGS RFNPHNWNYG SSSSSKSICG  540
ATTCNGSFCQ RTVKGNDRCE QHLDYGGRSS SSNSGARYSN HGGSSSSICG APTHNGSSCQ  600
RTVMGNGRCF QHLNYDGGSS SSSSSSSNFS SRYLNYGGCS TSICGAPTCN GSFCQRTVKG  660
NGRCFQHLNY GDSSSSSSNF SSPYSYYGGC STSICGAPTR NGSFCRRTVK GNGRCWQH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56780.1	2e-80	HRT-like family protein