PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022754868.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C3H | ||||||||
Protein Properties | Length: 996aa MW: 108288 Da PI: 7.3959 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 22.5 | 1.9e-07 | 531 | 551 | 5 | 25 |
--SGGGGTS--TTTTT-SS-S CS zf-CCCH 5 lCrffartGtCkyGdrCkFaH 25 +C +++ G+C +Gd C F+H XP_022754868.1 531 PCINYMTKGFCGRGDDCLFSH 551 7******************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 996 aa Download sequence |
MEEPQEPGPG VGAPFSFPPH RRSHLRSGTY RNLVRLISLC YGDSPLATAP PIIPLPQTPE 60 NGSNQGEPGG DDARDPGGSI VLDNREPANM VAQEGKAVDG GFEGAVFRDR GFSDTQMVID 120 EIEQIMQVEG QDLLNQNDLM VNSDMEATRF RDGEIGREQM LMTELENIMK GNEDCDKSSN 180 CLTTSFDWNG GDNCVGVSVT NQEEHDDHPP VVMEESGTVG QPQVDMEGGN TKIIEAFGFS 240 SDKSMTVEVS KSSEKVEDQS SLSKTNATCE KIEIQQKEME LEKFVCSNDR LASPGHMVED 300 GELEEGEIFG DIQLVNDSVD TLLDNAVVSE KKVEEKQVSV GAFDDKHLHC NEESKDDDKD 360 PEFTSFNTNV ARIANRVTEG ELEGSERDQM VFELGTTPRK EGSGNIQKQI GSSNQAIKAN 420 KKKDVGVCNK KKQSPIPTEK KEKKKKNKRK KRAERNRQLG VKRLKLQTVL KPKTVTYCRH 480 YLKGRCYEGE KCKYSHDTVP LTKSQPCSHF ARHSCLKGDE CPFDHQLSKY PCINYMTKGF 540 CGRGDDCLFS HKMSPAGDGA SLSNAHELQP KPSLQGDSDM RLNIGRTSHK NVDASSCSVG 600 AVSHKSKKQI VAETPTKTPD LACKGVNSLF VSKSSMVESS KLNQGSSSQK INESGRVGIQ 660 SIQSTLGVNS PFASKPSVAD SSKFSQGRSS LKMNESGRLG IQANQSELGT IQNVNDSPKR 720 KTEVVPRGIN FLSFGKSSLE DSNSKVSFAL NRADGYKQHP SENEGNRGKL SNQTTQSTSS 780 TDQKKTHPVL LPPGINLLSL GKPGISGSGL PCSSDNVNNG SLQKSNYAAD KQHNSSAISS 840 KLSISPQTSG QFSEWLAHKN APNSAQKSLI STLAVAKKFD NTKGRSVHES QHMSDKQYNS 900 NANPWKMPAS SLATSQSSEK MTPKNTPNSA QKALMSTLAV AAKLESGMMK NQSPVSSAVN 960 SEIRDGRIGE GSKTDSAKTS KILDILCSLS SKIKHT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 430 | 452 | KKKQSPIPTEKKEKKKKNKRKKR |
2 | 443 | 473 | KKKKNKRKKRAERNRQLGVKRLKLQTVLKPK |