PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022754868.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C3H
Protein Properties Length: 996aa    MW: 108288 Da    PI: 7.3959
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022754868.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.51.9e-07531551525
                     --SGGGGTS--TTTTT-SS-S CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaH 25 
                     +C +++  G+C +Gd C F+H
  XP_022754868.1 531 PCINYMTKGFCGRGDDCLFSH 551
                     7******************** PP

Sequence ? help Back to Top
Protein Sequence    Length: 996 aa     Download sequence    
MEEPQEPGPG VGAPFSFPPH RRSHLRSGTY RNLVRLISLC YGDSPLATAP PIIPLPQTPE  60
NGSNQGEPGG DDARDPGGSI VLDNREPANM VAQEGKAVDG GFEGAVFRDR GFSDTQMVID  120
EIEQIMQVEG QDLLNQNDLM VNSDMEATRF RDGEIGREQM LMTELENIMK GNEDCDKSSN  180
CLTTSFDWNG GDNCVGVSVT NQEEHDDHPP VVMEESGTVG QPQVDMEGGN TKIIEAFGFS  240
SDKSMTVEVS KSSEKVEDQS SLSKTNATCE KIEIQQKEME LEKFVCSNDR LASPGHMVED  300
GELEEGEIFG DIQLVNDSVD TLLDNAVVSE KKVEEKQVSV GAFDDKHLHC NEESKDDDKD  360
PEFTSFNTNV ARIANRVTEG ELEGSERDQM VFELGTTPRK EGSGNIQKQI GSSNQAIKAN  420
KKKDVGVCNK KKQSPIPTEK KEKKKKNKRK KRAERNRQLG VKRLKLQTVL KPKTVTYCRH  480
YLKGRCYEGE KCKYSHDTVP LTKSQPCSHF ARHSCLKGDE CPFDHQLSKY PCINYMTKGF  540
CGRGDDCLFS HKMSPAGDGA SLSNAHELQP KPSLQGDSDM RLNIGRTSHK NVDASSCSVG  600
AVSHKSKKQI VAETPTKTPD LACKGVNSLF VSKSSMVESS KLNQGSSSQK INESGRVGIQ  660
SIQSTLGVNS PFASKPSVAD SSKFSQGRSS LKMNESGRLG IQANQSELGT IQNVNDSPKR  720
KTEVVPRGIN FLSFGKSSLE DSNSKVSFAL NRADGYKQHP SENEGNRGKL SNQTTQSTSS  780
TDQKKTHPVL LPPGINLLSL GKPGISGSGL PCSSDNVNNG SLQKSNYAAD KQHNSSAISS  840
KLSISPQTSG QFSEWLAHKN APNSAQKSLI STLAVAKKFD NTKGRSVHES QHMSDKQYNS  900
NANPWKMPAS SLATSQSSEK MTPKNTPNSA QKALMSTLAV AAKLESGMMK NQSPVSSAVN  960
SEIRDGRIGE GSKTDSAKTS KILDILCSLS SKIKHT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1430452KKKQSPIPTEKKEKKKKNKRKKR
2443473KKKKNKRKKRAERNRQLGVKRLKLQTVLKPK