PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022754865.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB_related
Protein Properties Length: 264aa    MW: 29620.8 Da    PI: 10.0028
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022754865.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.43.3e-13556147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                     +++WT+eE+e l  +v+++G+g+Wk+I r          R+  ++k++w+++
   XP_022754865.1  5 KQKWTAEEEEALRAGVAKYGKGNWKSIQRDPElspllFARSNIDLKDKWRNL 56
                     79****************************999999977**********996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MGNPKQKWTA EEEEALRAGV AKYGKGNWKS IQRDPELSPL LFARSNIDLK DKWRNLSGGP  60
GGHGSREKSR TSKPKPSTDG STPQTSVPVK RNALPKPLID DLSKSFAPNW YNEMIIEALS  120
ALKEPNGSDN RAIVSYIEQR HEVPQTFRKQ LCSRLKRLVA VEKLEKVHNR YKIRKEERFG  180
TKTPSPKQKG VRSKQLHITC DAVEEASVNA AYLVAEAENK SFVAAEAVKE AERVSKMAED  240
MDSLLQLAKE IFETCSRGEI MLMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72740.21e-63MYB_related family protein